CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_04448
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_04448
T29821_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_04448T0
RRM
35
105
VYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLR
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_07863
Trichophyton rubrum
TERG_07863
N
0.986
TRV_02420
Trichophyton verrucosum
TRV_02420
N
0.986
ARB_06649
Arthroderma benhamiae
ARB_06649
N
0.986
TEQG_02324
Trichophyton equinum
TEQG_02324
N
0.986
TESG_00774
Trichophyton tonsurans
TESG_00774
N
0.986
MCYG_01624
Microsporum canis
MCYG_01624
N
0.986
ANIA_04665
Aspergillus nidulans
CADANIAG00005768
N
0.930
An07g05140
Aspergillus niger
CADANGAG00005786
N
0.915
ACLA_012010
Aspergillus clavatus
CADACLAG00000982
N
0.915
fgenesh1_pg.00771_#_290
Aspergillus carbonarius
fgenesh1_pg.00771_#_290
N
0.915
Pc22g16450
Penicillium chrysogenum
Pc22g16450
N
0.887
BDBG_01138
Blastomyces dermatitidis
BDBG_01138
N
0.887
NFIA_078760
Neosartorya fischeri
CADNFIAG00007376
N
0.887
ATEG_05773
Aspergillus terreus
CADATEAG00002943
N
0.887
PMAA_079770
Penicillium marneffei
PMAA_079770
N
0.873
PABG_03870
Paracoccidioides brasiliensis
PABG_03870
N
0.873
HCAG_00719
Histoplasma capsulatum
HCAG_00719
N
0.873
CIMG_06780
Coccidioides immitis
CIMG_06780
N
0.859
CPSG_07351
Coccidioides posadasii
CPSG_07351
N
0.859
fgenesh1_pm.C_scaffold_1000287
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_1000287
N
0.845
estExt_fgenesh1_pg.C_chr_10724
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_10724
N
0.845
UREG_03685
Uncinocarpus reesii
UREG_03685
N
0.845
GSTUMT00000089001
Tuber melanosporum
GSTUMT00000089001
N
0.803
BC1G_09608
Botrytis cinerea
BC1G_09608
N
0.803
SS1G_03313
Sclerotinia sclerotiorum
SS1G_03313
N
0.803
gw1.16.255.1
Trichoderma reesei
gw1.16.255.1
N
0.775
gw1.5.1175.1
Trichoderma atroviride
gw1.5.1175.1
N
0.775
e_gw1.12.826.1
Trichoderma virens
e_gw1.12.826.1
N
0.775
MGG_03086
Magnaporthe oryzae
MGG_03086
N
0.761
AB08288.1
Alternaria brassicicola
AB08288.1
N
0.761
estExt_Genewise1Plus.C_180344
Neurospora tetrasperma
estExt_Genewise1Plus.C_180344
N
0.761
NCU02467
Neurospora crassa
NCU02467
N
0.761
estExt_Genewise1.C_21128
Neurospora discreta
estExt_Genewise1.C_21128
N
0.761
e_gw1.1.5996.1
Thielavia terrestris
e_gw1.1.5996.1
N
0.746
SNOG_03018
Stagonospora nodorum
SNOG_03018
N
0.746
EAT89749.2
Phaeosphaeria nodorum
EAT89749.2
N
0.746
estExt_Genewise1.C_160643
Cochliobolus heterostrophus C5
estExt_Genewise1.C_160643
N
0.746
estExt_fgenesh1_kg.C_50230
Cryphonectria parasitica
estExt_fgenesh1_kg.C_50230
N
0.746
PTRG_01927
Pyrenophora tritici repentis
PTRG_01927
N
0.732
Pa_1_22200
Podospora anserina
Pa_1_22200
N
0.732
e_gw1.18.2245.1
Nectria haematococca
e_gw1.18.2245.1
N
0.732
FOXG_06071
Fusarium oxysporum
FOXG_06071
N
0.718
e_gw1.1.4685.1
Myceliophthora thermophila
e_gw1.1.4685.1
N
0.718
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.718
CHGG_06716
Chaetomium globosum
CHGG_06716
N
0.718
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.704
VDAG_02758
Verticillium dahliae
VDAG_02758
N
0.704
FVEG_03939
Fusarium verticillioides
FVEG_03939
N
0.704
FGSG_09419
Fusarium graminearum
FGSG_09419
N
0.704
VDBG_02287
Verticillium albo atrum
VDBG_02287
N
0.704