estExt_fgenesh1_pg.C_chr_10724 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_chr_10724 T50655_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_10724 RRM 35 105

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.944
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.845
MCYG_01624 Microsporum canis MCYG_01624 N 0.845
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.845
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.845
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.845
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.845
TERG_07863 Trichophyton rubrum TERG_07863 N 0.845
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.845
An07g05140 Aspergillus niger CADANGAG00005786 N 0.831
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.831
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.817
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.803
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.803
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.789
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.789
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.789
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.789
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.789
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.789
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.789
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.775
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.761
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.761
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.761
AB08288.1 Alternaria brassicicola AB08288.1 N 0.746
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.746
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.732
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.732
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.718
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.718
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.718
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.718
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.704
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.704