fgenesh1_pm.C_scaffold_1000287 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_1000287 T52061_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_1000287 RRM 35 105

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.944
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.845
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.831
MCYG_01624 Microsporum canis MCYG_01624 N 0.831
TERG_07863 Trichophyton rubrum TERG_07863 N 0.831
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.831
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.831
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.831
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.831
An07g05140 Aspergillus niger CADANGAG00005786 N 0.817
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.817
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.817
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.803
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.803
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.803
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.789
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.789
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.775
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.775
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.775
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.775
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.775
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.775
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.775
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.775
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.775
AB08288.1 Alternaria brassicicola AB08288.1 N 0.775
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.761
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.746
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.746
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.718
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.718
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.718
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.718
KLTH0F13442g Kluyveromyces thermotolerans KLTH0F13442g N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.718
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.718
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.704
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.704
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.704
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.704
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.704
NCU02467 Neurospora crassa NCU02467 N 0.704