Glyma12g06120.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma12g06120.1 T52807_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma12g06120.1 RRM 12 82
Glyma12g06120.1 RRM 99 170
Glyma12g06120.1 RRM 215 279

Links

Other RRM family RBPs
Other Glycine max RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma11g14150.1 Glycine max Glyma11g14150.1 N 0.962
Cucsa.301810 Cucumis sativus Cucsa.301810 I 0.812
cassava2135.valid.m1 Manihot esculenta cassava2135.valid.m1 I 0.803
Glyma13g41500.1 Glycine max Glyma13g41500.1 I 0.798
GSVIVG00025280001 Vitis vinifera GSVIVG00025280001 I 0.793
ppa005940m Prunus persica ppa005940m I 0.788
B9HNV7_POPTR Populus trichocarpa POPTR_0009s05920 I 0.788
30169.m006434 Ricinus communis 30169.m006434 I 0.784
MDP0000276227 Malus x domestica MDP0000276227 I 0.784
PK28027.1 Cannabis sativa PK28027.1 I 0.779
Medtr2g117480 Medicago truncatula Medtr2g117480 I 0.774
XM_002871835.1 Arabidopsis lyrata fgenesh2_kg.6__1954__AT5G19350.2 N 0.745
AT5G19350 Arabidopsis thaliana AT5G19350-TAIR-G N 0.740
mgf023806m Mimulus guttatus mgf023806m I 0.731
SB01G045570 Sorghum bicolor Sb01g045570 I 0.726
LOC_Os03g07800 Oryza sativa LOC_Os03g07800 I 0.721
GRMZM2G142557 Zea mays GRMZM2G142557 I 0.716
BRADI1G73030 Brachypodium distachyon BRADI1G73030 I 0.707