Glyma12g09530.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma12g09530.1 T52811_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma12g09530.1 RRM 131 200
Glyma12g09530.1 RRM 210 278
Glyma12g09530.1 RRM 447 517

Links

Other RRM family RBPs
Other Glycine max RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma11g18940.1 Glycine max Glyma11g18940.1 N 0.990
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.840
GSVIVG00036119001 Vitis vinifera GSVIVG00036119001 N 0.827
PK05405.1 Cannabis sativa PK05405.1 N 0.826
ppa004677m Prunus persica ppa004677m N 0.808
30055.m001569 Ricinus communis 30055.m001569 N 0.791
Medtr7g009690 Medicago truncatula Medtr7g009690 N 0.778
MDP0000250854 Malus x domestica MDP0000250854 N 0.775
B9HQ12_POPTR Populus trichocarpa POPTR_0009s16490 N 0.768
ppa004785m Prunus persica ppa004785m N 0.756
MDP0000851531 Malus x domestica MDP0000851531 N 0.751
MDP0000181657 Malus x domestica MDP0000181657 N 0.751
B9MYW2_POPTR Populus trichocarpa POPTR_0004s21210 N 0.749
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.726
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.718
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.717
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.714
mgf001576m Mimulus guttatus mgf001576m N 0.714
PDK_20s1316982g002 Phoenix dactylifera PDK_20s1316982g002 N 0.708
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.708
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.708
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.708
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.703