mgf001576m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf001576m T53586_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf001576m RRM 118 188
mgf001576m RRM 198 268
mgf001576m RRM 291 361

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000851531 Malus x domestica MDP0000851531 N 0.836
MDP0000181657 Malus x domestica MDP0000181657 N 0.831
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.826
ppa004785m Prunus persica ppa004785m N 0.817
GSVIVG00036119001 Vitis vinifera GSVIVG00036119001 N 0.813
PK04414.1 Cannabis sativa PK04414.1 N 0.812
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.812
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.812
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.803
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.803
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.803
28629.m000549 Ricinus communis 28629.m000549 N 0.789
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.789
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.784
PK05405.1 Cannabis sativa PK05405.1 N 0.775
Medtr7g127590 Medicago truncatula Medtr7g127590 N 0.765
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.756
GSVIVG00033857001 Vitis vinifera GSVIVG00033857001 N 0.752
PDK_20s1316982g002 Phoenix dactylifera PDK_20s1316982g002 N 0.742
30055.m001569 Ricinus communis 30055.m001569 N 0.737
ppa004677m Prunus persica ppa004677m N 0.723
chr1.CM0010.50.nc Lotus japonicus chr1.CM0010.50.nc N 0.723
Glyma11g18940.1 Glycine max Glyma11g18940.1 N 0.714
Glyma12g09530.1 Glycine max Glyma12g09530.1 N 0.714
B9HQ12_POPTR Populus trichocarpa POPTR_0009s16490 N 0.709
MDP0000250854 Malus x domestica MDP0000250854 N 0.709
Medtr7g009690 Medicago truncatula Medtr7g009690 N 0.704