PDK_20s1316982g002 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1316982g002 T58055_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1316982g002 RRM 74 142
PDK_20s1316982g002 RRM 152 221
PDK_20s1316982g002 RRM 246 313

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000181657 Malus x domestica MDP0000181657 N 0.789
MDP0000851531 Malus x domestica MDP0000851531 N 0.789
ppa004785m Prunus persica ppa004785m N 0.784
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.783
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.783
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.783
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.770
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.770
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.769
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.764
GSVIVG00036119001 Vitis vinifera GSVIVG00036119001 N 0.757
PK04414.1 Cannabis sativa PK04414.1 N 0.746
GSVIVG00033857001 Vitis vinifera GSVIVG00033857001 N 0.743
mgf001576m Mimulus guttatus mgf001576m N 0.742
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.736
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.732
28629.m000549 Ricinus communis 28629.m000549 N 0.728
PK05405.1 Cannabis sativa PK05405.1 N 0.723
GRMZM2G075942 Zea mays GRMZM2G075942 N 0.714
SB05G002300 Sorghum bicolor Sb05g002300 N 0.714
Glyma11g18940.1 Glycine max Glyma11g18940.1 N 0.712
30055.m001569 Ricinus communis 30055.m001569 N 0.712
Glyma12g09530.1 Glycine max Glyma12g09530.1 N 0.708
B9HQ12_POPTR Populus trichocarpa POPTR_0009s16490 N 0.703
GRMZM2G101867 Zea mays GRMZM2G101867 N 0.700