GSVIVG00036119001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00036119001 T44788_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00036119001 RRM 57 127
GSVIVT00036119001 RRM 137 208
GSVIVT00036119001 RRM 231 301

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.883
PK05405.1 Cannabis sativa PK05405.1 N 0.879
ppa004677m Prunus persica ppa004677m N 0.850
MDP0000851531 Malus x domestica MDP0000851531 N 0.841
MDP0000181657 Malus x domestica MDP0000181657 N 0.841
Glyma12g09530.1 Glycine max Glyma12g09530.1 N 0.827
Glyma11g18940.1 Glycine max Glyma11g18940.1 N 0.827
30055.m001569 Ricinus communis 30055.m001569 N 0.822
ppa004785m Prunus persica ppa004785m N 0.822
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.818
MDP0000250854 Malus x domestica MDP0000250854 N 0.818
mgf001576m Mimulus guttatus mgf001576m N 0.813
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.799
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.799
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.794
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.794
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.794
PK04414.1 Cannabis sativa PK04414.1 N 0.794
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.790
GSVIVG00033857001 Vitis vinifera GSVIVG00033857001 N 0.790
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.790
Medtr7g009690 Medicago truncatula Medtr7g009690 N 0.780
B9HQ12_POPTR Populus trichocarpa POPTR_0009s16490 N 0.776
28629.m000549 Ricinus communis 28629.m000549 N 0.771
B9MYW2_POPTR Populus trichocarpa POPTR_0004s21210 N 0.762
chr1.CM0010.50.nc Lotus japonicus chr1.CM0010.50.nc N 0.757
PDK_20s1316982g002 Phoenix dactylifera PDK_20s1316982g002 N 0.757
Medtr7g127590 Medicago truncatula Medtr7g127590 N 0.743