1600010087 (Ostreococcus tauri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 1600010087 T55123_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
1600010087 RRM 21 88

Links

Other RRM family RBPs
Other Ostreococcus tauri RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
eugene.1500010066 Ostreococcus lucimarinus eugene.1500010066 N 0.897
e_gw1.11.964.1 Ostreococcus RCC809 e_gw1.11.964.1 N 0.838
estExt_fgeneshCV_pm.C_140033 Chlorella vulgaris estExt_fgeneshCV_pm.C_140033 N 0.794
estExt_Genemark1.C_140122 Coccomyxa C 169 estExt_Genemark1.C_140122 N 0.794
GRMZM2G358416 Zea mays GRMZM2G358416 N 0.779
SB01G003790 Sorghum bicolor Sb01g003790 N 0.779
GRMZM2G107745 Zea mays GRMZM2G107745 N 0.779
B9HNI9_POPTR Populus trichocarpa POPTR_0009s07180 N 0.779
PK21780.1 Cannabis sativa PK21780.1 N 0.765
B9GG60_POPTR Populus trichocarpa POPTR_0001s28000 N 0.765
LOC_Os03g59710 Oryza sativa LOC_Os03g59710 N 0.765
cassava30358.valid.m1 Manihot esculenta cassava30358.valid.m1 N 0.765
ppa013407m Prunus persica ppa013407m N 0.765
MDP0000185506 Malus x domestica MDP0000185506 N 0.765
Glyma14g04020.1 Glycine max Glyma14g04020.1 N 0.765
ppa013405m Prunus persica ppa013405m N 0.765
GSVIVG00037329001 Vitis vinifera GSVIVG00037329001 N 0.765
29868.m000351 Ricinus communis 29868.m000351 N 0.765
BRADI1G04240 Brachypodium distachyon BRADI1G04240 N 0.765
BGIOSIBCE013412 Oryza indica BGIOSIBCE013412 N 0.765
Glyma02g44710.1 Glycine max Glyma02g44710.1 N 0.754
Medtr5g096400 Medicago truncatula Medtr5g096400 N 0.754
AT5G12190 Arabidopsis thaliana AT5G12190-TAIR-G N 0.754
XM_002873508.1 Arabidopsis lyrata scaffold_601250.1 N 0.754
chr2.CM0308.280.nc Lotus japonicus chr2.CM0308.280.nc N 0.754
mgf016428m Mimulus guttatus mgf016428m N 0.754
estExt_fgenesh2_pg.C_240194 Selaginella moellendorfii estExt_fgenesh2_pg.C_240194 N 0.750
estExt_Genewise1.C_630098 Physcomitrella patens estExt_Genewise1.C_630098 N 0.750
estExt_Genewise1Plus.C_10491 Micromonas pusilla estExt_Genewise1Plus.C_10491 N 0.750
ENSCSAVG00000008970 Ciona savignyi ENSCSAVG00000008970 N 0.750
e_gw1.17.197.1 Volvox carteri e_gw1.17.197.1 N 0.750
ENSCING00000012689 Ciona intestinalis ENSCING00000012689 N 0.750
Cucsa.086930 Cucumis sativus Cucsa.086930 N 0.739
Aqu1.214150 Amphimedon queenslandica Aqu1.214150 N 0.735
estExt_GenewiseW_1.C_340090 Chlamydomonas reinhardtii estExt_GenewiseW_1.C_340090 N 0.735
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.721
LOAG_04189 Loa loa LOAG_04189 N 0.710
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.710
CRE22109 Caenorhabditis remanei CRE22109 N 0.706
MDP0000916880 Malus x domestica MDP0000916880 N 0.706
CJA01433 Caenorhabditis japonica CJA01433 N 0.706
CBN08400 Caenorhabditis brenneri CBN08400 N 0.706
CBG06987 Caenorhabditis briggsae CBG06987 N 0.706
C50D2.5 Caenorhabditis elegans C50D2.5 N 0.706
SNAPOd2T00023714001 Oikopleura dioica SNAPOd2T00023714001 N 0.706