RBM28 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSGGOG00000004644 T081049_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
RBM28
M12220_2.00		 Gorilla gorilla NGWGUAGW JPLE
Sasse et al.(2025)
RM_Gor.gor_ENSGGOG00000004644 		0.007

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M00630_2.00 		Homo sapiens GUGGGUCUCGK HTR-SELEX
Jolma et al.(2020)
0.858
RBM28
M00629_2.00 		Homo sapiens KRGGYYGWGCGGUGG HTR-SELEX
Jolma et al.(2020)
0.858
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
0.858
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.007
(89.24%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000004553 RRM 2 43
ENSGGOP00000004553 RRM 72 153
ENSGGOP00000004553 RRM 290 379
ENSGGOP00000004553 RRM 443 533
ENSGGOP00000024126 RRM 2 43
ENSGGOP00000024126 RRM 72 153
ENSGGOP00000024126 RRM 274 363
ENSGGOP00000024126 RRM 427 517

RNA contacting residues

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.858
RBM28 Homo sapiens ENSG00000106344 D 0.858
ENSNLEG00000012307 Nomascus leucogenys ENSNLEG00000012307 I 0.855
ENSPPYG00000017975 Pongo abelii ENSPPYG00000017975 I 0.855
ENSCSAG00000010161 Chlorocebus sabaeus ENSCSAG00000010161 I 0.841
ENSPANG00000022295 Papio anubis ENSPANG00000022295 I 0.838
ENSMEUG00000009611 Macropus eugenii ENSMEUG00000009611 I 0.826
Myotis_brandtii_RBM28_10012817 Myotis brandtii Myotis_brandtii_RBM28_10012817 I 0.820
ENSP00000223073 Macaca fascicularis ENSP00000223073 I 0.812
ENSSHAG00000017017 Sarcophilus harrisii ENSSHAG00000017017 I 0.812
ENSMPUG00000006511 Mustela putorius furo ENSMPUG00000006511 I 0.797
RBM28 Equus caballus ENSECAG00000007745 I 0.796
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.795
RBM28 Canis familiaris ENSCAFG00000001667 I 0.794
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.794
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.794
ENSAMEG00000004776 Ailuropoda melanoleuca ENSAMEG00000004776 I 0.791
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.790
RBM28 Felis catus ENSFCAG00000000946 I 0.788
ENSSTOG00000002169 Ictidomys tridecemlineatus ENSSTOG00000002169 I 0.787
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.786
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.782
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.771
Rbm28 Mus musculus ENSMUSG00000029701 I 0.767
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.764
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.758
RBM28 Sorex araneus ENSSARG00000008303 I 0.755
ENSOARG00000002547 Ovis aries ENSOARG00000002547 I 0.749
RBM28 Bos taurus ENSBTAG00000017001 I 0.741
ENSP00000223073-D1 Bos grunniens ENSP00000223073-D1 I 0.738
RBM28 Echinops telfairi ENSETEG00000007130 I 0.730
RBM28 Microcebus murinus ENSMICG00000000107 I 0.728