Myotis_brandtii_RBM28_10012817 (Myotis brandtii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 Myotis_brandtii_RBM28_10012817 T119412_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
Myotis_brandtii_RBM28_10012817
M17545_2.00		 Myotis brandtii NGWGUAGW JPLE
Sasse et al.(2025)
RM_Myo.bra_Myotis_brandtii_RBM28_10012817 		0.010

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M00630_2.00 		Homo sapiens GUGGGUCUCGK HTR-SELEX
Jolma et al.(2020)
0.895
RBM28
M00629_2.00 		Homo sapiens KRGGYYGWGCGGUGG HTR-SELEX
Jolma et al.(2020)
0.895
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
0.895
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.010
(88.28%)

RNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_RBM28_10012817 RRM 543 612
Myotis_brandtii_RBM28_10012817 RRM 641 723
Myotis_brandtii_RBM28_10012817 RRM 881 970
Myotis_brandtii_RBM28_10012817 RRM 1034 1124

RNA contacting residues

Links

Other RRM family RBPs
Other Myotis brandtii RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.953
RBM28 Equus caballus ENSECAG00000007745 I 0.911
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.902
ENSMPUG00000006511 Mustela putorius furo ENSMPUG00000006511 I 0.901
ENSSTOG00000002169 Ictidomys tridecemlineatus ENSSTOG00000002169 I 0.899
RBM28 Canis familiaris ENSCAFG00000001667 I 0.899
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.896
RBM28 Felis catus ENSFCAG00000000946 I 0.896
RBM28 Homo sapiens ENSG00000106344 D 0.895
ENSPPYG00000017975 Pongo abelii ENSPPYG00000017975 I 0.895
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.895
ENSAMEG00000004776 Ailuropoda melanoleuca ENSAMEG00000004776 I 0.893
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.890
ENSNLEG00000012307 Nomascus leucogenys ENSNLEG00000012307 I 0.890
ENSCSAG00000010161 Chlorocebus sabaeus ENSCSAG00000010161 I 0.884
ENSPANG00000022295 Papio anubis ENSPANG00000022295 I 0.882
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.881
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.881
Rbm28 Mus musculus ENSMUSG00000029701 I 0.862
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.859
ENSP00000223073 Macaca fascicularis ENSP00000223073 I 0.855
ENSOARG00000002547 Ovis aries ENSOARG00000002547 I 0.845
RBM28 Bos taurus ENSBTAG00000017001 I 0.839
ENSP00000223073-D1 Bos grunniens ENSP00000223073-D1 I 0.837
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.836
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.834
RBM28 Echinops telfairi ENSETEG00000007130 I 0.832
RBM28 Microcebus murinus ENSMICG00000000107 I 0.823
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.820
RBM28 Sorex araneus ENSSARG00000008303 I 0.814
ENSMEUG00000009611 Macropus eugenii ENSMEUG00000009611 I 0.778
ENSSHAG00000017017 Sarcophilus harrisii ENSSHAG00000017017 I 0.772
ENSTSYG00000002892 Tarsius syrichta ENSTSYG00000002892 I 0.711