RBM28 (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSMODG00000015151 T083161_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
RBM28
M16772_2.00		 Monodelphis domestica NGWGUAGW JPLE
Sasse et al.(2025)
RM_Mon.dom_ENSMODG00000015151 		0.010

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M00630_2.00 		Homo sapiens GUGGGUCUCGK HTR-SELEX
Jolma et al.(2020)
0.882
RBM28
M00629_2.00 		Homo sapiens KRGGYYGWGCGGUGG HTR-SELEX
Jolma et al.(2020)
0.882
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
0.882
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.010
(89.32%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000018934 RRM 3 82
ENSMODP00000018934 RRM 115 197
ENSMODP00000018934 RRM 334 423
ENSMODP00000018934 RRM 486 579

RNA contacting residues

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Equus caballus ENSECAG00000007745 I 0.897
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.896
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.894
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.891
ENSSTOG00000002169 Ictidomys tridecemlineatus ENSSTOG00000002169 I 0.885
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.882
ENSPPYG00000017975 Pongo abelii ENSPPYG00000017975 I 0.882
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.882
ENSAMEG00000004776 Ailuropoda melanoleuca ENSAMEG00000004776 I 0.882
RBM28 Homo sapiens ENSG00000106344 D 0.882
ENSCSAG00000010161 Chlorocebus sabaeus ENSCSAG00000010161 I 0.879
RBM28 Felis catus ENSFCAG00000000946 I 0.879
ENSMPUG00000006511 Mustela putorius furo ENSMPUG00000006511 I 0.876
ENSNLEG00000012307 Nomascus leucogenys ENSNLEG00000012307 I 0.876
ENSPANG00000022295 Papio anubis ENSPANG00000022295 I 0.874
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.873
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.870
RBM28 Canis familiaris ENSCAFG00000001667 I 0.870
Rbm28 Mus musculus ENSMUSG00000029701 I 0.865
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.865
ENSP00000223073 Macaca fascicularis ENSP00000223073 I 0.852
RBM28 Echinops telfairi ENSETEG00000007130 I 0.847
ENSSHAG00000017017 Sarcophilus harrisii ENSSHAG00000017017 I 0.842
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.840
ENSMEUG00000009611 Macropus eugenii ENSMEUG00000009611 I 0.839
ENSOARG00000002547 Ovis aries ENSOARG00000002547 I 0.837
Myotis_brandtii_RBM28_10012817 Myotis brandtii Myotis_brandtii_RBM28_10012817 I 0.836
RBM28 Bos taurus ENSBTAG00000017001 I 0.834
ENSP00000223073-D1 Bos grunniens ENSP00000223073-D1 I 0.832
RBM28 Microcebus murinus ENSMICG00000000107 I 0.818
RBM28 Sorex araneus ENSSARG00000008303 I 0.801
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.758
rbm28 Xenopus tropicalis XB-GENE-919947 I 0.746
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.716
ENSTSYG00000002892 Tarsius syrichta ENSTSYG00000002892 I 0.715