cassava2158.valid.m1 (Manihot esculenta)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		cassava2158.valid.m1 T00833_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava2158.valid.m1 CCCH ZF 220 245
cassava2158.valid.m1 RRM 360 420

Links

Other CCCH ZF,RRM family RBPs
Other Manihot esculenta RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG08763 Caenorhabditis briggsae CBG08763 N 0.000
CJA00142 Caenorhabditis japonica CJA00142 N 0.000
CJA00525 Caenorhabditis japonica CJA00525 N 0.000
CJA00955 Caenorhabditis japonica CJA00955 N 0.000
CJA02546 Caenorhabditis japonica CJA02546 N 0.000
CJA02670 Caenorhabditis japonica CJA02670 N 0.000
CJA02757 Caenorhabditis japonica CJA02757 N 0.000
CJA03777 Caenorhabditis japonica CJA03777 N 0.000
CJA04336 Caenorhabditis japonica CJA04336 N 0.000
CJA05078 Caenorhabditis japonica CJA05078 N 0.000
CJA05814 Caenorhabditis japonica CJA05814 N 0.000
CJA05850 Caenorhabditis japonica CJA05850 N 0.000
CJA07934 Caenorhabditis japonica CJA07934 N 0.000
CJA09584 Caenorhabditis japonica CJA09584 N 0.000
CJA10177 Caenorhabditis japonica CJA10177 N 0.000
CJA10256 Caenorhabditis japonica CJA10256 N 0.000
CJA10427 Caenorhabditis japonica CJA10427 N 0.000
CJA11030 Caenorhabditis japonica CJA11030 N 0.000
CJA12763 Caenorhabditis japonica CJA12763 N 0.000
CJA12868 Caenorhabditis japonica CJA12868 N 0.000
CJA13138 Caenorhabditis japonica CJA13138 N 0.000
CJA13217 Caenorhabditis japonica CJA13217 N 0.000
CJA13245 Caenorhabditis japonica CJA13245 N 0.000
CJA13503 Caenorhabditis japonica CJA13503 N 0.000
CJA13676 Caenorhabditis japonica CJA13676 N 0.000
CJA15447 Caenorhabditis japonica CJA15447 N 0.000
CJA15515 Caenorhabditis japonica CJA15515 N 0.000
CJA17240 Caenorhabditis japonica CJA17240 N 0.000
CJA17448 Caenorhabditis japonica CJA17448 N 0.000
CJA18092 Caenorhabditis japonica CJA18092 N 0.000
CJA18651 Caenorhabditis japonica CJA18651 N 0.000
CJA19647 Caenorhabditis japonica CJA19647 N 0.000
CJA21076 Caenorhabditis japonica CJA21076 N 0.000
CJA21786 Caenorhabditis japonica CJA21786 N 0.000
CJA22105 Caenorhabditis japonica CJA22105 N 0.000
CJA23027 Caenorhabditis japonica CJA23027 N 0.000
CJA23492 Caenorhabditis japonica CJA23492 N 0.000
CJA23650 Caenorhabditis japonica CJA23650 N 0.000
CJA23793 Caenorhabditis japonica CJA23793 N 0.000
CJA23880 Caenorhabditis japonica CJA23880 N 0.000
CJA24356 Caenorhabditis japonica CJA24356 N 0.000
CJA24410 Caenorhabditis japonica CJA24410 N 0.000
CJA25140 Caenorhabditis japonica CJA25140 N 0.000
CJA26146 Caenorhabditis japonica CJA26146 N 0.000
CJA26989 Caenorhabditis japonica CJA26989 N 0.000
CJA27243 Caenorhabditis japonica CJA27243 N 0.000
CJA27741 Caenorhabditis japonica CJA27741 N 0.000
CJA28002 Caenorhabditis japonica CJA28002 N 0.000
CJA28132 Caenorhabditis japonica CJA28132 N 0.000
CJA29053 Caenorhabditis japonica CJA29053 N 0.000
CRE02519 Caenorhabditis remanei CRE02519 N 0.000
CRE03331 Caenorhabditis remanei CRE03331 N 0.000
CRE06628 Caenorhabditis remanei CRE06628 N 0.000
CRE09308 Caenorhabditis remanei CRE09308 N 0.000
CRE11513 Caenorhabditis remanei CRE11513 N 0.000
CRE13684 Caenorhabditis remanei CRE13684 N 0.000
CRE29150 Caenorhabditis remanei CRE29150 N 0.000