XM_002878724.1 (Arabidopsis lyrata)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		fgenesh2_kg.4__375__AT2G24590.1 T07376_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.4__375__AT2G24590.1 RRM 4 63
fgenesh2_kg.4__375__AT2G24590.1 CCHC ZF 99 116

Links

Other CCHC ZF,RRM family RBPs
Other Arabidopsis lyrata RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GA18446-RA Drosophila pseudoobscura FBgn0078448 N 0.000
GF11912 Drosophila ananassae FBgn0088951 N 0.000
GG19902 Drosophila erecta FBgn0112102 N 0.000
GH21568 Drosophila grimshawi FBgn0129029 N 0.000
GI19540 Drosophila mojavensis FBgn0142277 N 0.000
GL11105 Drosophila persimilis FBgn0148715 N 0.000
GM11803 Drosophila sechellia FBgn0166745 N 0.000
GJ21111 Drosophila virilis FBgn0208244 N 0.000
GK21872 Drosophila willistoni FBgn0223857 N 0.000
GE11426 Drosophila yakuba FBgn0229232 N 0.000
CG4806 Drosophila melanogaster FBgn0260456 N 0.000