Khdrbs2 (Dipodomys ordii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDORG00000005701 T18674_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.988
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.845
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		0.765
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		0.765
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000005334 KH 30 109

Links

Other KH family RBPs
Other Dipodomys ordii RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RS2Z33 Arabidopsis thaliana AT2G37340-TAIR-G N 0.000
At-RS2Z Arabidopsis thaliana AT3G53500-TAIR-G N 0.000
GRMZM2G083975 Zea mays GRMZM2G083975 N 0.000
GSVIVG00025580001 Vitis vinifera GSVIVG00025580001 N 0.000
LOC_Os01g06290 Oryza sativa LOC_Os01g06290 N 0.000
mgf016290m Mimulus guttatus mgf016290m N 0.000
A9PGS4_POPTR Populus trichocarpa POPTR_0006s23170 N 0.000
ppa009074m Prunus persica ppa009074m N 0.000
ppa009294m Prunus persica ppa009294m N 0.000
ppa009671m Prunus persica ppa009671m N 0.000