estExt_Genewise1Plus.C_20041 (Sporobolomyces roseus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_Genewise1Plus.C_20041 T20961_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_20041 KH 176 232

Links

Other KH family RBPs
Other Sporobolomyces roseus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
85673 Helobdella robusta 85673 N 0.759
AAH41273 Xenopus laevis AAH41273 N 0.724
AAH72210 Xenopus laevis AAH72210 N 0.737
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.702
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.702
amel4_ncbi_hmm4445 Apis mellifera amel4_ncbi_hmm4445 N 0.707
An02g03350 Aspergillus niger CADANGAG00001848 N 0.789
ANIA_05875 Aspergillus nidulans CADANIAG00007161 N 0.789
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.702
CMR456C Cyanidioschyzon merolae CMR456C N 0.702
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.702
DGIL_AUG5s1009g5t1 Acyrtosiphon pisum DGIL_AUG5s1009g5t1 N 0.737
EDP43963.1 Malassezia globosa EDP43963.1 N 0.702
KRR1 Oryzias latipes ENSORLG00000019616 N 0.772
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.737
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.719
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.702
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.702
estExt_Genewise1Plus.C_70089 Capitella teleta estExt_Genewise1Plus.C_70089 N 0.719
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.719
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.737
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.702
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.719
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.737
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.737
GF14827 Drosophila ananassae FBgn0091854 N 0.707
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.702
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.702
FVEG_06170 Fusarium verticillioides FVEG_06170 N 0.702
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.702
GSTUMT00008009001 Tuber melanosporum GSTUMT00008009001 N 0.776
gw1.1.562.1 Micromonas pusilla gw1.1.562.1 N 0.737
nasonia_NCBI_hmm386444 Nasonia vitripennis nasonia_NCBI_hmm386444 N 0.719
PASA_GEN_0400107 Daphnia pulex PASA_GEN_0400107 N 0.702
SJAG_00657 Schizosaccharomyces japonicus SJAG_00657 N 0.737
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.702
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.719
UM03241 Ustilago maydis UM03241 N 0.719