CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Pc12g11760
(
Penicillium chrysogenum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Pc12g11760
T21913_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc12g11760.t1
KH
272
346
VDAIKLDSTMHTLVCGRTRKNIKLIEAATGTAIYFPPPFPQIFGYIPPGANRRSEDEVYITGETPEQIARAKQKL
Pc12g11760.t1
KH
451
488
RSMLSDICTNSEAEVSFDNLTFTINGSDDAVKAAMTVI
Pc12g11760.t1
KH
502
563
RVKIELANEHKEFVSGKKNGKINKIMGQSNVQIIFDGFNEYNFYIDVCGNQYESTKNGLDLV
Pc12g11760.t1
KH
570
640
SISFHVPDQYHKRIIGIGGQHIQRIMKKYSVFVKFSNAMDRGGMGKEDDDIKVDNVICRTPARNAQSLDLV
Pc12g11760.t1
KH
659
716
RVVINRLYHRELLARMTEIDELEKKWNCKIEFPSTELASDVVTISGPEYQVPQAVDAL
Links
Other
KH
family RBPs
Other
Penicillium chrysogenum
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BDBG_03236
Blastomyces dermatitidis
BDBG_03236
N
0.832
ACLA_074000
Aspergillus clavatus
CADACLAG00007261
N
0.888
ATEG_01323
Aspergillus terreus
CADATEAG00002653
N
0.941
estExt_Genewise1Plus.C_140444
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_140444
N
0.732
estExt_Genewise1Plus.C_210177
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_210177
N
0.801
estExt_GeneWisePlus.C_20165
Trichoderma reesei
estExt_GeneWisePlus.C_20165
N
0.724
e_gw1.2.59.1
Trichoderma atroviride
e_gw1.2.59.1
N
0.740
fgenesh1_pg.00866_#_126
Aspergillus carbonarius
fgenesh1_pg.00866_#_126
N
0.951
FGSG_06181
Fusarium graminearum
FGSG_06181
N
0.733
FOXG_08528
Fusarium oxysporum
FOXG_08528
N
0.733
FVEG_06144
Fusarium verticillioides
FVEG_06144
N
0.733
HCAG_05999
Histoplasma capsulatum
HCAG_05999
N
0.872
MCYG_03492
Microsporum canis
MCYG_03492
N
0.790
MGYG_03096
Microsporum gypseum
MGYG_03096
N
0.749
PABG_06460
Paracoccidioides brasiliensis
PABG_06460
N
0.765
TEQG_01206
Trichophyton equinum
TEQG_01206
N
0.735
TERG_04920
Trichophyton rubrum
TERG_04920
N
0.743
TESG_05929
Trichophyton tonsurans
TESG_05929
N
0.743
UREG_06534
Uncinocarpus reesii
UREG_06534
N
0.821