CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BDBG_08699
(
Blastomyces dermatitidis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BDBG_08699
T28325_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BDBG_08699T0
RRM
254
319
LFITGVEDDLPEHALRTFFTEFGTLRSLICSHRSHCAFVNYATREAAEKAANHCQGKAVIQGCPLR
Links
Other
RRM
family RBPs
Other
Blastomyces dermatitidis
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_05996
Arthroderma benhamiae
ARB_05996
N
0.818
BC1G_07906
Botrytis cinerea
BC1G_07906
N
0.727
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.894
AFLA_041240
Aspergillus flavus
CADAFLAG00005451
N
0.803
AFUA_4G03640
Aspergillus fumigatus
CADAFUAG00001443
N
0.833
An14g01580
Aspergillus niger
CADANGAG00011093
N
0.818
ANIA_07145
Aspergillus nidulans
CADANIAG00000312
N
0.803
AO090011000290
Aspergillus oryzae
CADAORAG00005058
N
0.803
ATEG_02173
Aspergillus terreus
CADATEAG00000030
N
0.833
NFIA_029780
Neosartorya fischeri
CADNFIAG00002898
N
0.833
CIMG_08445
Coccidioides immitis
CIMG_08445
N
0.879
CPSG_08272
Coccidioides posadasii
CPSG_08272
N
0.864
estExt_Genewise1Plus.C_22014
Trichoderma atroviride
estExt_Genewise1Plus.C_22014
N
0.712
estExt_Genewise1Plus.C_chr_31411
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_31411
N
0.712
e_gw1.8.691.1
Mycosphaerella fijiensis
e_gw1.8.691.1
N
0.727
fgenesh1_pg.00795_#_104
Aspergillus carbonarius
fgenesh1_pg.00795_#_104
N
0.773
fgenesh1_pg.C_scaffold_1000369
Trichoderma virens
fgenesh1_pg.C_scaffold_1000369
N
0.712
fgenesh5_pg.C_scaffold_6000164
Trichoderma reesei
fgenesh5_pg.C_scaffold_6000164
N
0.742
FGSG_12577
Fusarium graminearum
FGSG_12577
N
0.727
FOXG_15630
Fusarium oxysporum
FOXG_15630
N
0.727
FVEG_13092
Fusarium verticillioides
FVEG_13092
N
0.712
HCAG_07565
Histoplasma capsulatum
HCAG_07565
N
0.970
MCYG_02745
Microsporum canis
MCYG_02745
N
0.803
MGG_10567
Magnaporthe oryzae
MGG_10567
N
0.712
MGYG_08476
Microsporum gypseum
MGYG_08476
N
0.833
PABG_03629
Paracoccidioides brasiliensis
PABG_03629
N
0.939
Pc12g14830
Penicillium chrysogenum
Pc12g14830
N
0.864
PMAA_006050
Penicillium marneffei
PMAA_006050
N
0.803
SS1G_03468
Sclerotinia sclerotiorum
SS1G_03468
N
0.727
TEQG_04110
Trichophyton equinum
TEQG_04110
N
0.848
TERG_05432
Trichophyton rubrum
TERG_05432
N
0.818
TESG_01774
Trichophyton tonsurans
TESG_01774
N
0.848
TRV_06346
Trichophyton verrucosum
TRV_06346
N
0.818
UREG_02520
Uncinocarpus reesii
UREG_02520
N
0.879
VDAG_01644
Verticillium dahliae
VDAG_01644
N
0.712