fgenesh1_pm.00772_#_82 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.00772_#_82 T56586_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.00772_#_82 RRM 49 119

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29983.m003140 Ricinus communis 29983.m003140 N 0.000
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.704
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.000
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.746
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.000
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.000
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.704
Bm1_02935 Brugia malayi Bm1_02935 N 0.000
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.000
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.000
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.000
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.000
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.000
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.761
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.761
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.000
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.000
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.000
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.000
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.000
NCBP2 Equus caballus ENSECAG00000016153 N 0.000
NCBP2 Homo sapiens ENSG00000114503 N 0.000
NCBP2 Gallus gallus ENSGALG00000006843 N 0.704
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.000
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.000
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.000
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.704
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.000
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.000
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.000
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.704
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.000
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.000
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.000
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.000
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.000
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.000
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.000
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.000
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.000
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.000
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.000
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.000
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.000
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.000
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.000
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.000
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.000
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.000
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.704
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.930
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.000
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.915
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.901
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.718
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.000
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.930
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.761
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.000
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.000
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.000
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.000
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.000
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.803
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.718
LOAG_03270 Loa loa LOAG_03270 N 0.000
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.000
MDP0000315402 Malus x domestica MDP0000315402 N 0.000
mgf009384m Mimulus guttatus mgf009384m N 0.000
mgf009822m Mimulus guttatus mgf009822m N 0.000
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.718
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.746
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.000
PHUM535920 Pediculus humanus PHUM535920 N 0.732
PK11911.1 Cannabis sativa PK11911.1 N 0.000
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.000
B9MYE5_POPTR Populus trichocarpa POPTR_0017s04640 N 0.000
ppa010346m Prunus persica ppa010346m N 0.000
SB04G025800 Sorghum bicolor Sb04g025800 N 0.000
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.817
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.000