PHUM535920 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM535920 T45382_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM535920-PA RRM 37 107

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

174 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.915
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.901
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.873
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.859
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.859
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.859
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.859
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.859
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.859
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.859
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.859
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.859
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.859
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.859
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.859
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.859
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.859
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.859
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.859
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.859
NCBP2 Equus caballus ENSECAG00000016153 N 0.859
NCBP2 Homo sapiens ENSG00000114503 N 0.859
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.859
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.859
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.859
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.859
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.859
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.859
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.845
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.845
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.845
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.845
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.845
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.845
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.845
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.845
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.845
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.845
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.845
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.845
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.831
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.831
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.831
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.831
LOAG_03270 Loa loa LOAG_03270 N 0.831
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.831
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.831
NCBP2 Gallus gallus ENSGALG00000006843 N 0.831
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.831
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.831
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.817
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.817
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.817
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.817
Bm1_02935 Brugia malayi Bm1_02935 N 0.817
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.817
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.817
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.803
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.803
P52299 Xenopus laevis P52299 N 0.803
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.803
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.803
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.803
AAH72902 Xenopus laevis AAH72902 N 0.803
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.789
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.789
ncbp2 Danio rerio ENSDARG00000014898 N 0.789
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.789
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.789
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.789
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.789
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.789
91084 Helobdella robusta 91084 N 0.789
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.789
CAA59259 Xenopus laevis CAA59259 N 0.789
2118330B Xenopus laevis 2118330B N 0.789
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.789
GK11244 Drosophila willistoni FBgn0213255 N 0.775
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.775
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.775
GE25514 Drosophila yakuba FBgn0242580 N 0.775
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.775
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.775
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.775
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.775
GL12592 Drosophila persimilis FBgn0150198 N 0.775
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.775
GD19204 Drosophila simulans FBgn0190709 N 0.775
GM15280 Drosophila sechellia FBgn0170200 N 0.775
NCBP2 Sorex araneus ENSSARG00000014294 N 0.775
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.775
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.775
Cbp20 Drosophila melanogaster FBgn0022943 N 0.775
NCU00210 Neurospora crassa NCU00210 N 0.761
GG22670 Drosophila erecta FBgn0114835 N 0.761
GF16759 Drosophila ananassae FBgn0093780 N 0.761
GH15101 Drosophila grimshawi FBgn0122576 N 0.761
GI23717 Drosophila mojavensis FBgn0146442 N 0.761
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.761
GJ23276 Drosophila virilis FBgn0210378 N 0.761
GJ18756 Drosophila virilis FBgn0205908 N 0.761
TERG_03424 Trichophyton rubrum TERG_03424 N 0.761
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.761
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.761
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.761
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.761
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.761
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.761
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.761
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.761
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.761
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.761
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.761
MCYG_04468 Microsporum canis MCYG_04468 N 0.761
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.761
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.761
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.761
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.761
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.761
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.761
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.761
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.761
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.761
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.761
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.746
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.746
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.746
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.746
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.746
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.746
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.746
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.746
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.746
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.733
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.733
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.732
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.732
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.732
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.732
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.732
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.732
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.732
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.732
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.732
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.732
An12g03930 Aspergillus niger CADANGAG00009835 N 0.732
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.732
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.732
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.727
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.718
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.718
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.718
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.718
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.718
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.718
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.718
PGTG_01720 Puccinia graminis PGTG_01720 N 0.718
SB04G025800 Sorghum bicolor Sb04g025800 N 0.718
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.704
SNAPOd2T00014922001 Oikopleura dioica SNAPOd2T00014922001 N 0.704
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.704
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.704
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.704
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.704
PK11911.1 Cannabis sativa PK11911.1 N 0.704
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.704
Minc02990 Meloidogyne incognita Minc02990 N 0.704
Minc06129 Meloidogyne incognita Minc06129 N 0.704
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.704
gw1.14.317.1 Chlorella NC64A gw1.14.317.1 N 0.704
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.704
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.704
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.704
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.704