KHDRBS2 (Gasterosteus aculeatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGACG00000006097 T18829_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.914
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.810
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		0.741
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		0.741
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000008073 KH 61 141

Links

Other KH family RBPs
Other Gasterosteus aculeatus RBPs

109 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHDRBS1 Homo sapiens ENSG00000121774 D 0.741
KHDRBS3 Homo sapiens ENSG00000131773 D 0.810
KHDRBS2 Homo sapiens ENSG00000112232 D 0.914
Khdrbs1 Mus musculus ENSMUSG00000028790 D 0.741
KHDRBS3 Ochotona princeps ENSOPRG00000000404 I 0.810
KHDRBS1 Pteropus vampyrus ENSPVAG00000013289 I 0.741
KHDRBS3 Pteropus vampyrus ENSPVAG00000017021 I 0.788
Khdrbs3 Rattus norvegicus ENSRNOG00000009539 I 0.726
Khdrbs2 Rattus norvegicus ENSRNOG00000012284 I 0.914
KHDRBS2 Oryctolagus cuniculus ENSOCUG00000012344 I 0.914
KHDRBS1 Sorex araneus ENSSARG00000008479 I 0.726
KHDRBS3 Sorex araneus ENSSARG00000011751 I 0.726
KHDRBS2 Sus scrofa ENSSSCG00000001490 I 0.914
KHDRBS3 Sus scrofa ENSSSCG00000005941 I 0.810
KHDRBS1 Oryctolagus cuniculus ENSOCUG00000007654 I 0.741
Q6J4Q9_PANTR Pan troglodytes ENSPTRG00000020608 I 0.810
KHDRBS2 Pan troglodytes ENSPTRG00000018311 I 0.914
KHDRBS1 Ochotona princeps ENSOPRG00000005131 I 0.741
KHDRBS2 Oryzias latipes ENSORLG00000010165 I 0.938
KHDRBS3 Oryzias latipes ENSORLG00000013441 I 0.786
KHDRBS1 Oryzias latipes ENSORLG00000017156 I 0.765
KHDRBS1 Oryzias latipes ENSORLG00000020884 I 0.741
KHDRBS2 Procavia capensis ENSPCAG00000001426 I 0.802
KHDRBS1 Procavia capensis ENSPCAG00000009844 I 0.741
ENSPPYG00000001605 Pongo pygmaeus ENSPPYG00000001605 I 0.741
KHDRBS1 Pan troglodytes ENSPTRG00000000469 I 0.741
KHDRBS3 Otolemur garnettii ENSOGAG00000005150 I 0.810
KHDRBS3 Oryctolagus cuniculus ENSOCUG00000000743 I 0.810
KHDRBS1 Taeniopygia guttata ENSTGUG00000017346 I 0.738
KHDRBS3 Spermophilus tridecemlineatus ENSSTOG00000008710 I 0.810
KHDRBS3 Tursiops truncatus ENSTTRG00000001270 I 0.810
KHDRBS2 Tursiops truncatus ENSTTRG00000005591 I 0.914
KHDRBS1 Tursiops truncatus ENSTTRG00000009637 I 0.741
KHDRBS2 Vicugna pacos ENSVPAG00000001469 I 0.914
KHDRBS1 Vicugna pacos ENSVPAG00000006966 I 0.741
khdrbs2 Xenopus tropicalis ENSXETG00000004451 I 0.716
khdrbs1 Xenopus tropicalis ENSXETG00000005246 I 0.706
khdrbs3 Xenopus tropicalis ENSXETG00000009227 I 0.810
gw.576.16.1 Branchiostoma floridae gw.576.16.1 I 0.704
Ame_R010128 Ailuropoda melanoleuca Ame_R010128 I 0.741
Ame_R010681 Ailuropoda melanoleuca Ame_R010681 I 0.810
KHDRBS2 Tarsius syrichta ENSTSYG00000007203 I 0.914
KHDRBS1 Tarsius syrichta ENSTSYG00000004921 I 0.741
KHDRBS2 Takifugu rubripes ENSTRUG00000015760 I 0.963
KHDRBS1 Spermophilus tridecemlineatus ENSSTOG00000014138 I 0.741
KHDRBS3 Tupaia belangeri ENSTBEG00000004773 I 0.810
KHDRBS1 Tupaia belangeri ENSTBEG00000016857 I 0.741
KHDRBS3 Taeniopygia guttata ENSTGUG00000012611 I 0.810
KHDRBS2 Taeniopygia guttata ENSTGUG00000012786 I 0.914
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000013071 I 0.741
KHDRBS3 Tetraodon nigroviridis ENSTNIG00000014021 I 0.786
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000017471 I 0.747
KHDRBS1 Takifugu rubripes ENSTRUG00000010001 I 0.741
KHDRBS1 Takifugu rubripes ENSTRUG00000012039 I 0.747
KHDRBS3 Takifugu rubripes ENSTRUG00000013451 I 0.786
Ame_R015982 Ailuropoda melanoleuca Ame_R015982 I 0.768
KHDRBS3 Ornithorhynchus anatinus ENSOANG00000014074 I 0.810
KHDRBS2 Anolis carolinensis ENSACAG00000006691 I 0.914
KHDRBS1 Cavia porcellus ENSCPOG00000024148 I 0.741
KHDRBS2 Cavia porcellus ENSCPOG00000025621 I 0.914
khdrbs1a Danio rerio ENSDARG00000052856 I 0.728
khdrbs2 Danio rerio ENSDARG00000069469 I 0.975
khdrbs1b Danio rerio ENSDARG00000070475 I 0.728
ENSDARG00000078082 Danio rerio ENSDARG00000078082 I 0.728
KHDRBS2 Dasypus novemcinctus ENSDNOG00000014028 I 0.914
Khdrbs2 Dipodomys ordii ENSDORG00000005701 I 0.901
LOC100058116 Equus caballus ENSECAG00000010194 I 0.810
KHDRBS1 Equus caballus ENSECAG00000019346 I 0.741
LOC100056966 Equus caballus ENSECAG00000021541 I 0.914
KHDRBS3 Cavia porcellus ENSCPOG00000000342 I 0.810
LOC100414412 Callithrix jacchus ENSCJAG00000006580 I 0.741
KHDRBS1 Anolis carolinensis ENSACAG00000011693 I 0.729
KHDRBS3 Anolis carolinensis ENSACAG00000012042 I 0.810
A4FV24_BOVIN Bos taurus ENSBTAG00000002181 I 0.810
Q29RQ2_BOVIN Bos taurus ENSBTAG00000012497 I 0.741
KHDRBS2 Bos taurus ENSBTAG00000043990 I 0.914
KHDRBS3 Canis familiaris ENSCAFG00000001166 I 0.810
KHDRBS2 Canis familiaris ENSCAFG00000002470 I 0.914
KHDRBS1 Canis familiaris ENSCAFG00000010777 I 0.741
ENSCHOG00000006973 Choloepus hoffmanni ENSCHOG00000006973 I 0.741
LOC100395662 Callithrix jacchus ENSCJAG00000001766 I 0.914
LOC100399263 Callithrix jacchus ENSCJAG00000004331 I 0.810
KHDRBS2 Erinaceus europaeus ENSEEUG00000003986 I 0.914
KHDRBS3 Echinops telfairi ENSETEG00000004701 I 0.810
KHDRBS2 Meleagris gallopavo ENSMGAG00000013877 I 0.914
KHDRBS2 Myotis lucifugus ENSMLUG00000005484 I 0.778
KHDRBS2 Macaca mulatta ENSMMUG00000003329 I 0.914
Q6J4Q6_MACMU Macaca mulatta ENSMMUG00000022248 I 0.810
KHDRBS1 Macaca mulatta ENSMMUG00000023438 I 0.741
KHDRBS3 Monodelphis domestica ENSMODG00000000975 I 0.810
XM_001365874.1 Monodelphis domestica ENSMODG00000017551 I 0.741
KHDRBS2 Monodelphis domestica ENSMODG00000018714 I 0.914
Khdrbs3 Mus musculus ENSMUSG00000022332 I 0.810
Khdrbs2 Mus musculus ENSMUSG00000026058 I 0.914
KHDRBS1 Loxodonta africana ENSLAFG00000009414 I 0.741
KHDRBS3 Meleagris gallopavo ENSMGAG00000012888 I 0.810
KHDRBS1 Meleagris gallopavo ENSMGAG00000004455 I 0.741
KHDRBS1 Felis catus ENSFCAG00000006511 I 0.741
KHDRBS3 Gasterosteus aculeatus ENSGACG00000008847 I 0.774
KHDRBS1 Gasterosteus aculeatus ENSGACG00000009219 I 0.741
KHDR1_CHICK Gallus gallus ENSGALG00000003272 I 0.741
KHDRBS3 Gallus gallus ENSGALG00000016203 I 0.810
KHDRBS2 Gallus gallus ENSGALG00000016276 I 0.914
Q6J4Q8_9PRIM Gorilla gorilla ENSGGOG00000000940 I 0.810
KHDRBS1 Gorilla gorilla ENSGGOG00000008633 I 0.741
KHDRBS2 Gorilla gorilla ENSGGOG00000025068 I 0.914
KHDRBS3 Loxodonta africana ENSLAFG00000004849 I 0.810
KHDRBS2 Loxodonta africana ENSLAFG00000006655 I 0.914
KHDRBS1 Ornithorhynchus anatinus ENSOANG00000012357 I 0.741