FUBP3 (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000018658 T19665_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000047792 KH 83 145
ENSTRUP00000047792 KH 168 232
ENSTRUP00000047792 KH 259 321
ENSTRUP00000047792 KH 356 421
ENSTRUP00000047793 KH 80 142
ENSTRUP00000047793 KH 165 229
ENSTRUP00000047793 KH 256 318
ENSTRUP00000047793 KH 353 418
ENSTRUP00000047794 KH 80 142
ENSTRUP00000047794 KH 165 229
ENSTRUP00000047794 KH 256 318
ENSTRUP00000047794 KH 353 418
ENSTRUP00000047795 KH 98 160
ENSTRUP00000047795 KH 183 247
ENSTRUP00000047795 KH 274 336
ENSTRUP00000047795 KH 371 436
ENSTRUP00000047796 KH 85 147
ENSTRUP00000047796 KH 170 234
ENSTRUP00000047796 KH 261 323
ENSTRUP00000047796 KH 358 423

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAN77161 Xenopus laevis AAN77161 I 0.702
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.717
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.713
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.713
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.713
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.717
Fubp1 Mus musculus ENSMUSG00000028034 I 0.709
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.717
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.713
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.705
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.713
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.713
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.713
AAI69815 Xenopus laevis AAI69815 I 0.717
AAH70981 Xenopus laevis AAH70981 I 0.717
AAH44277 Xenopus laevis AAH44277 I 0.705
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.710
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.721
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.713
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.713
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.713
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.705
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.713
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.717
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.721
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.713
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.713
FUBP1 Equus caballus ENSECAG00000010867 I 0.713
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.713
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.713
fubp1 Danio rerio ENSDARG00000029248 I 0.709
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.713
FUBP1 Homo sapiens ENSG00000162613 I 0.717
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.710
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.713
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.794
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.704
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.825
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.802
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.848
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.981
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.782
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.809
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.833
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.813
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.809
AAH60400 Xenopus laevis AAH60400 N 0.825
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.802
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.805
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.813
Fubp3 Mus musculus ENSMUSG00000026843 N 0.805
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.825
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.805
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.942
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.833
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.751
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.817
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.833
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.809
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.794
FUBP3 Homo sapiens ENSG00000107164 N 0.805
FUBP3 Felis catus ENSFCAG00000005113 N 0.805
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.805
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.805
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.837
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.786
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.805
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.942
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.802
LOC100069755 Equus caballus ENSECAG00000011500 N 0.782
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.708
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.805