FUBP3 (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000013259 T19657_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000033736 KH 82 144
ENSTRUP00000033736 KH 167 231
ENSTRUP00000033736 KH 257 319
ENSTRUP00000033736 KH 357 422
ENSTRUP00000033737 KH 83 145
ENSTRUP00000033737 KH 168 232
ENSTRUP00000033737 KH 258 320
ENSTRUP00000033737 KH 358 423
ENSTRUP00000033738 KH 97 159
ENSTRUP00000033738 KH 182 246
ENSTRUP00000033738 KH 272 334
ENSTRUP00000033738 KH 372 437
ENSTRUP00000033739 KH 101 163
ENSTRUP00000033739 KH 186 250
ENSTRUP00000033739 KH 276 338
ENSTRUP00000033739 KH 376 441
ENSTRUP00000033740 KH 101 163
ENSTRUP00000033740 KH 186 250
ENSTRUP00000033740 KH 276 338
ENSTRUP00000033740 KH 376 441
ENSTRUP00000033741 KH 86 148
ENSTRUP00000033741 KH 171 235
ENSTRUP00000033741 KH 250 311
ENSTRUP00000033741 KH 349 414

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.980
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.961
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.879
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.833
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.833
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.829
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.829
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.829
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.825
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.825
FUBP3 Felis catus ENSFCAG00000005113 N 0.825
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.825
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.825
FUBP3 Homo sapiens ENSG00000107164 N 0.825
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.825
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.825
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.825
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.825
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.825
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.821
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.821
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.821
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.821
Fubp3 Mus musculus ENSMUSG00000026843 N 0.821
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.817
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.817
AAH60400 Xenopus laevis AAH60400 N 0.813
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.809
FUBP3 Gasterosteus aculeatus ENSGACG00000000957 N 0.806
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.805
LOC100069755 Equus caballus ENSECAG00000011500 N 0.802
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.798
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.790
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.786
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.782
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.767
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.767
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.767
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.767
FUBP1 Homo sapiens ENSG00000162613 I 0.767
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.767
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.764
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.764
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.764
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.764
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.764
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.764
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.764
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.764
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.764
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.764
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.764
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.764
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.764
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.764
FUBP1 Equus caballus ENSECAG00000010867 I 0.764
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.764
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.764
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.761
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.761
Fubp1 Mus musculus ENSMUSG00000028034 I 0.760
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.756
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.756
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.756
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.746
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.744
AAH70981 Xenopus laevis AAH70981 I 0.740
AAI69815 Xenopus laevis AAI69815 I 0.740
AAH44277 Xenopus laevis AAH44277 I 0.725
fubp1 Danio rerio ENSDARG00000029248 I 0.725
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.724
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.721
AAN77161 Xenopus laevis AAN77161 I 0.721
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.717
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.715
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.714
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.712
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.710