CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP3
(
Myotis lucifugus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMLUG00000008743
T19037_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000007983
KH
50
112
TEEFKVPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL
ENSMLUP00000007983
KH
135
199
IQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV
ENSMLUP00000007983
KH
226
288
SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVI
ENSMLUP00000007983
KH
343
392
XXGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI
Links
Other
KH
family RBPs
Other
Myotis lucifugus
RBPs
79 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R003042
Ailuropoda melanoleuca
Ame_R003042
N
0.926
FUBP3
Canis familiaris
ENSCAFG00000019942
N
0.922
FUBP3
Microcebus murinus
ENSMICG00000015452
N
0.918
FUBP3
Loxodonta africana
ENSLAFG00000011611
N
0.914
FUBP3
Dasypus novemcinctus
ENSDNOG00000014533
N
0.907
FUBP3
Pteropus vampyrus
ENSPVAG00000001510
N
0.907
Fubp3
Rattus norvegicus
ENSRNOG00000009139
N
0.907
FUBP3
Felis catus
ENSFCAG00000005113
N
0.907
A6QP83_BOVIN
Bos taurus
ENSBTAG00000013072
N
0.907
FUBP3
Ochotona princeps
ENSOPRG00000008648
N
0.907
Fubp3
Mus musculus
ENSMUSG00000026843
N
0.903
LOC100399862
Callithrix jacchus
ENSCJAG00000020542
N
0.903
FUBP3
Pan troglodytes
ENSPTRG00000021474
N
0.899
ENSPPYG00000019693
Pongo pygmaeus
ENSPPYG00000019693
N
0.899
FUBP3
Gorilla gorilla
ENSGGOG00000011318
N
0.899
FUBP3
Macaca mulatta
ENSMMUG00000008249
N
0.899
FUBP3
Homo sapiens
ENSG00000107164
N
0.899
FUBP3
Cavia porcellus
ENSCPOG00000010315
N
0.891
FUBP3
Monodelphis domestica
ENSMODG00000012105
N
0.891
FUBP3
Procavia capensis
ENSPCAG00000001717
N
0.887
LOC100069755
Equus caballus
ENSECAG00000011500
N
0.883
FUBP3
Ornithorhynchus anatinus
ENSOANG00000001042
N
0.875
FUBP3
Taeniopygia guttata
ENSTGUG00000004662
N
0.868
FUBP3
Meleagris gallopavo
ENSMGAG00000005342
N
0.868
Q5ZM76_CHICK
Gallus gallus
ENSGALG00000003941
N
0.868
fubp3
Xenopus tropicalis
ENSXETG00000001344
N
0.860
AAH60400
Xenopus laevis
AAH60400
N
0.844
FUBP3
Sus scrofa
ENSSSCG00000005702
N
0.794
ENSDARG00000007049
Danio rerio
ENSDARG00000007049
N
0.790
FUBP1
Ochotona princeps
ENSOPRG00000001175
N
0.782
FUBP3
Otolemur garnettii
ENSOGAG00000007555
N
0.778
FUBP3
Oryzias latipes
ENSORLG00000017565
N
0.774
FUBP3
Tetraodon nigroviridis
ENSTNIG00000005858
N
0.770
FUBP3
Takifugu rubripes
ENSTRUG00000013259
N
0.767
FUBP1
Homo sapiens
ENSG00000162613
I
0.760
ENSPPYG00000001219
Pongo pygmaeus
ENSPPYG00000001219
I
0.760
FUBP1
Gorilla gorilla
ENSGGOG00000027554
I
0.760
FUBP1
Pan troglodytes
ENSPTRG00000000888
I
0.760
FUBP1
Macaca mulatta
ENSMMUG00000002899
I
0.760
FUBP3
Tetraodon nigroviridis
ENSTNIG00000009019
N
0.759
ENSSSCG00000003771
Sus scrofa
ENSSSCG00000003771
I
0.756
FUBP1
Callithrix jacchus
ENSCJAG00000007062
I
0.756
FUBP1
Choloepus hoffmanni
ENSCHOG00000008177
I
0.756
FUBP1
Cavia porcellus
ENSCPOG00000002757
I
0.756
FUBP1
Procavia capensis
ENSPCAG00000012617
I
0.756
FUBP1
Otolemur garnettii
ENSOGAG00000014233
I
0.756
FUBP1
Meleagris gallopavo
ENSMGAG00000009424
I
0.756
FUBP1
Ornithorhynchus anatinus
ENSOANG00000009777
I
0.756
FUBP1
Loxodonta africana
ENSLAFG00000003273
I
0.756
FUBP1
Equus caballus
ENSECAG00000010867
I
0.756
Fubp1
Dipodomys ordii
ENSDORG00000016534
I
0.756
FUBP1
Canis familiaris
ENSCAFG00000020361
I
0.756
Q08DJ3_BOVIN
Bos taurus
ENSBTAG00000008926
I
0.756
FUBP1
Tursiops truncatus
ENSTTRG00000000096
I
0.756
FUBP1
Tarsius syrichta
ENSTSYG00000000148
I
0.756
ENSSSCG00000003767
Sus scrofa
ENSSSCG00000003767
I
0.756
FUBP1
Myotis lucifugus
ENSMLUG00000014802
I
0.756
FUBP1
Vicugna pacos
ENSVPAG00000004709
I
0.756
FUBP3
Oryzias latipes
ENSORLG00000007103
N
0.755
Q5ZHW0_CHICK
Gallus gallus
ENSGALG00000008939
I
0.753
Ame_R010564
Ailuropoda melanoleuca
Ame_R010564
I
0.753
FUBP1
Spermophilus tridecemlineatus
ENSSTOG00000014312
I
0.752
Fubp1
Mus musculus
ENSMUSG00000028034
I
0.752
FUBP1
Anolis carolinensis
ENSACAG00000006310
I
0.752
FUBP3
Gasterosteus aculeatus
ENSGACG00000016704
N
0.751
FUBP3
Takifugu rubripes
ENSTRUG00000018658
N
0.751
FUBP1
Taeniopygia guttata
ENSTGUG00000006841
I
0.739
fubp1
Xenopus tropicalis
ENSXETG00000013137
I
0.733
AAH70981
Xenopus laevis
AAH70981
I
0.725
AAI69815
Xenopus laevis
AAI69815
I
0.725
FUBP1
Oryctolagus cuniculus
ENSOCUG00000002225
I
0.722
fubp1
Danio rerio
ENSDARG00000029248
I
0.717
ENSORLG00000003540
Oryzias latipes
ENSORLG00000003540
I
0.717
AAH44277
Xenopus laevis
AAH44277
I
0.717
FUBP3
Gasterosteus aculeatus
ENSGACG00000000957
N
0.715
ENSTRUG00000004615
Takifugu rubripes
ENSTRUG00000004615
I
0.713
FUBP1
Pteropus vampyrus
ENSPVAG00000014637
N
0.713
ENSGACG00000016563
Gasterosteus aculeatus
ENSGACG00000016563
I
0.712
AAN77161
Xenopus laevis
AAN77161
I
0.709