FUBP1 (Meleagris gallopavo)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMGAG00000009424 T18987_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.759
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.759
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.759
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.759
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000009788 KH 61 123
ENSMGAP00000009788 KH 146 210
ENSMGAP00000009788 KH 236 298
ENSMGAP00000009788 KH 338 403

Links

Other KH family RBPs
Other Meleagris gallopavo RBPs

108 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.988
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.988
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.988
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.988
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.988
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.988
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.988
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.988
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.988
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.988
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.988
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.988
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.988
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.988
FUBP1 Equus caballus ENSECAG00000010867 I 0.988
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.985
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.984
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.984
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.984
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.984
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.984
FUBP1 Homo sapiens ENSG00000162613 I 0.984
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.984
Fubp1 Mus musculus ENSMUSG00000028034 I 0.984
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.981
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.981
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.973
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.970
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.930
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.923
AAH70981 Xenopus laevis AAH70981 I 0.914
AAI69815 Xenopus laevis AAI69815 I 0.914
AAH44277 Xenopus laevis AAH44277 I 0.907
AAN77161 Xenopus laevis AAN77161 I 0.887
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.880
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.861
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.860
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.860
fubp1 Danio rerio ENSDARG00000029248 I 0.844
FUBP1 Microcebus murinus ENSMICG00000014463 N 0.837
FUBP1 Pteropus vampyrus ENSPVAG00000014637 N 0.813
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.798
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.798
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.798
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.795
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.795
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.795
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.795
FUBP3 Homo sapiens ENSG00000107164 N 0.795
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.795
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.795
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.791
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.791
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.791
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.791
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.791
Fubp3 Mus musculus ENSMUSG00000026843 N 0.787
FUBP3 Felis catus ENSFCAG00000005113 N 0.787
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.783
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.779
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.779
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.779
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.779
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.775
AAH60400 Xenopus laevis AAH60400 N 0.775
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.775
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.771
LOC100069755 Equus caballus ENSECAG00000011500 N 0.760
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.760
KHSRP Felis catus ENSFCAG00000003731 I 0.759
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.759
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.759
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.759
KHSRP Sus scrofa ENSSSCG00000013538 I 0.759
KHSRP Homo sapiens ENSG00000088247 D 0.759
LOC100065608 Equus caballus ENSECAG00000018305 I 0.759
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.759
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.759
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.759
KHSRP Canis familiaris ENSCAFG00000018667 I 0.759
LOC505564 Bos taurus ENSBTAG00000021018 I 0.759
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.759
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.759
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.759
Khsrp Mus musculus ENSMUSG00000007670 I 0.759
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.759
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.759
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.759
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.756
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.756
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.756
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.755
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.755
KHSRP Microcebus murinus ENSMICG00000007863 I 0.751
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.748
AAI61696 Xenopus laevis AAI61696 I 0.747
AAI69923 Xenopus laevis AAI69923 I 0.743
AAN77160 Xenopus laevis AAN77160 I 0.743
KHSRP Danio rerio ENSDARG00000026489 I 0.728
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.725
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.717
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.716
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.716
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.713
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.705
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.704
KHSRP Oryzias latipes ENSORLG00000011882 I 0.700
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.700