Hnrnpd (Dipodomys ordii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDORG00000012507 T36517_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.748
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000011759 RRM 2 71
ENSDORP00000011759 RRM 87 157

Links

Other RRM family RBPs
Other Dipodomys ordii RBPs

109 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPAB Homo sapiens ENSG00000197451 D 0.748
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.979
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.706
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.944
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.741
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.713
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.986
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.713
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.727
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.993
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.713
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.748
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.860
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.986
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.713
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.713
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.986
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.741
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.713
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.986
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.713
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.769
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.993
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.713
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.736
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.734
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.986
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.727
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.986
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.993
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.748
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.944
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.713
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.993
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.741
AAH43814 Xenopus laevis AAH43814 I 0.727
AAH74212 Xenopus laevis AAH74212 I 0.727
AAH97855 Xenopus laevis AAH97855 I 0.937
AAU25946 Xenopus laevis AAU25946 I 0.937
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.713
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.993
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.853
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.713
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.979
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.741
HNRNPD Sorex araneus ENSSARG00000006883 I 0.965
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.986
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.713
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.713
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.741
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.706
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.986
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.853
ABV54637 Xenopus laevis ABV54637 I 0.727
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.965
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.713
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.741
hnrnpab Danio rerio ENSDARG00000007960 I 0.734
HNRNPAB Danio rerio ENSDARG00000017568 I 0.755
hnrnpd Danio rerio ENSDARG00000059246 I 0.881
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.713
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.748
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.713
LOC100060733 Equus caballus ENSECAG00000009344 I 0.993
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.741
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.713
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.720
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.993
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.713
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.769
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.741
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.986
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.713
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.734
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.713
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.993
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.986
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.713
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.706
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.993
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.965
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.986
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.790
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.713
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.741
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.706
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.986
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.713
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.993
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.965
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.741
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.993
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.713
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.993
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.713
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.741
HNRNPD Homo sapiens ENSG00000138668 I 0.993
HNRPDL Homo sapiens ENSG00000152795 I 0.713
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.727
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.986
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.741
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.706
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.713
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.748
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.993
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.790
HNRNPD Tupaia belangeri ENSTBEG00000002327 N 0.908
HNRNPD Gasterosteus aculeatus ENSGACG00000015669 N 0.874
HNRNPD Otolemur garnettii ENSOGAG00000004075 N 0.817