HNRNPD (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000013499 T42114_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.752
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000016494 RRM 32 102
ENSTNIP00000016494 RRM 118 187

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.943
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.901
hnrnpd Danio rerio ENSDARG00000059246 I 0.894
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.873
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.867
HNRNPD Gasterosteus aculeatus ENSGACG00000015669 N 0.867
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.867
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.867
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.866
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.866
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.866
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.866
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.866
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.866
HNRNPD Homo sapiens ENSG00000138668 I 0.866
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.866
LOC100060733 Equus caballus ENSECAG00000009344 I 0.866
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.866
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.866
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.866
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.866
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.866
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.866
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.866
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.860
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.860
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.860
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.860
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.860
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.860
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.860
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.859
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.858
HNRNPD Sorex araneus ENSSARG00000006883 I 0.858
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.853
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.853
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.853
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.852
AAU25946 Xenopus laevis AAU25946 I 0.838
AAH97855 Xenopus laevis AAH97855 I 0.838
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.838
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.831
HNRNPD Tupaia belangeri ENSTBEG00000002327 N 0.776
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.759
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.759
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.759
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.759
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.759
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.754
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.752
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.752
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.752
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.752
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.752
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.752
HNRNPAB Homo sapiens ENSG00000197451 D 0.752
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.752
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.752
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.745
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.745
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.745
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.739
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.738
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.738
AAH74212 Xenopus laevis AAH74212 I 0.730
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.730
ABV54637 Xenopus laevis ABV54637 I 0.730
AAH43814 Xenopus laevis AAH43814 I 0.730
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.730
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.730
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.730
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.730
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.730
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.716
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.716
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.716
HNRNPD Otolemur garnettii ENSOGAG00000004075 N 0.711
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.709
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.709
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.709
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.709
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.709
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.709
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.709
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.709
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.709
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.709
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.709
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.709
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.709
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.709
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.709
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.709
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.709
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.709
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.709
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.709
HNRPDL Homo sapiens ENSG00000152795 I 0.709
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.709
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.709
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.709
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.709
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.709
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.709
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.709
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.702
HNRNPAB Danio rerio ENSDARG00000017568 I 0.702