Hnrnpab (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000003645 T41029_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.964
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.800
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000004885 RRM 77 146
ENSRNOP00000004885 RRM 161 230
ENSRNOP00000038183 RRM 77 146
ENSRNOP00000038183 RRM 161 230
ENSRNOP00000062597 RRM 76 145
ENSRNOP00000062597 RRM 160 229

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

88 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Hnrnpab Mus musculus ENSMUSG00000020358 I 1.000
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.964
HNRNPAB Homo sapiens ENSG00000197451 D 0.964
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.964
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.957
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.957
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.957
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.957
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.950
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.950
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.950
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.950
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.950
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.943
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.943
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.937
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.936
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.929
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.929
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.929
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.929
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.921
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.921
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.914
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.907
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.886
AAH43814 Xenopus laevis AAH43814 I 0.879
AAH74212 Xenopus laevis AAH74212 I 0.871
ABV54637 Xenopus laevis ABV54637 I 0.871
ENSGGOG00000028444 Gorilla gorilla ENSGGOG00000028444 I 0.864
LOC100390818 Callithrix jacchus ENSCJAG00000012235 I 0.864
HNRNPAB Danio rerio ENSDARG00000017568 I 0.850
hnrnpab Danio rerio ENSDARG00000007960 I 0.843
HNRNPAB Tetraodon nigroviridis ENSTNIG00000007596 I 0.821
HNRNPAB Oryzias latipes ENSORLG00000015501 I 0.816
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.814
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.814
HNRNPAB Takifugu rubripes ENSTRUG00000008411 I 0.814
HNRNPAB Sus scrofa ENSSSCG00000001932 I 0.809
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.807
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.807
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.800
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.761
HNRNPAB Tursiops truncatus ENSTTRG00000010604 I 0.757
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.754
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.754
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.754
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.754
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.754
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.754
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.754
LOC100060733 Equus caballus ENSECAG00000009344 I 0.754
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.754
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.754
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.754
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.754
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.754
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.754
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.754
HNRNPD Homo sapiens ENSG00000138668 I 0.754
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.754
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.748
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.748
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.748
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.748
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.748
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.748
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.748
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.748
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.748
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.748
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.746
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.746
HNRNPD Sorex araneus ENSSARG00000006883 I 0.745
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.745
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.741
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.741
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.741
AAU25946 Xenopus laevis AAU25946 I 0.739
AAH97855 Xenopus laevis AAH97855 I 0.739
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.730
hnrnpd Danio rerio ENSDARG00000059246 I 0.725
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.725
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.718
LOC100069254 Equus caballus ENSECAG00000014816 I 0.711
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.709
HNRNPAB Erinaceus europaeus ENSEEUG00000013226 I 0.707