HNRNPAB (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000026424 T39784_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.951
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.782
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000018969 RRM 9 80
ENSOCUP00000018969 RRM 95 164

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

87 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.972
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.972
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.972
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.965
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.958
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.958
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.958
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.958
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.958
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.951
HNRNPAB Homo sapiens ENSG00000197451 D 0.951
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.951
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.944
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.937
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.937
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.937
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.937
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.923
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.915
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.915
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.915
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.908
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.901
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.894
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.894
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.873
ENSGGOG00000028444 Gorilla gorilla ENSGGOG00000028444 I 0.866
AAH43814 Xenopus laevis AAH43814 I 0.866
AAH74212 Xenopus laevis AAH74212 I 0.859
ABV54637 Xenopus laevis ABV54637 I 0.859
LOC100390818 Callithrix jacchus ENSCJAG00000012235 I 0.852
HNRNPAB Sus scrofa ENSSSCG00000001932 I 0.825
hnrnpab Danio rerio ENSDARG00000007960 I 0.824
HNRNPAB Danio rerio ENSDARG00000017568 I 0.824
HNRNPAB Takifugu rubripes ENSTRUG00000008411 I 0.810
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.810
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.796
HNRNPAB Tetraodon nigroviridis ENSTNIG00000007596 I 0.796
HNRNPAB Oryzias latipes ENSORLG00000015501 I 0.790
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.789
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.782
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.782
HNRNPAB Tursiops truncatus ENSTTRG00000010604 I 0.775
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.757
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.755
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.754
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.750
HNRNPD Homo sapiens ENSG00000138668 I 0.748
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.748
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.748
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.748
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.748
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.748
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.748
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.748
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.748
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.748
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.748
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.748
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.748
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.748
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.748
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.748
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.748
hnrnpd Danio rerio ENSDARG00000059246 I 0.748
LOC100060733 Equus caballus ENSECAG00000009344 I 0.748
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.748
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.743
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.743
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.743
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.743
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.743
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.743
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.743
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.743
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.743
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.741
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.739
HNRNPD Sorex araneus ENSSARG00000006883 I 0.739
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.736
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.736
AAU25946 Xenopus laevis AAU25946 I 0.734
AAH97855 Xenopus laevis AAH97855 I 0.734
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.725
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.713
HNRNPAB Erinaceus europaeus ENSEEUG00000013226 I 0.711
LOC100069254 Equus caballus ENSECAG00000014816 I 0.708