HNRNPAB (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000004217 T39072_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.921
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.793
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000005194 RRM 32 101
ENSMODP00000005194 RRM 116 185

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

120 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 1.000
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.957
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.936
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.921
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.921
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.921
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.921
HNRNPAB Homo sapiens ENSG00000197451 D 0.921
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.921
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.921
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.921
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.921
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.921
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.914
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.914
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.914
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.914
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.907
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.907
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.907
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.907
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.907
AAH74212 Xenopus laevis AAH74212 I 0.900
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.900
ABV54637 Xenopus laevis ABV54637 I 0.900
AAH43814 Xenopus laevis AAH43814 I 0.900
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.894
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.894
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.893
HNRNPAB Danio rerio ENSDARG00000017568 I 0.879
hnrnpab Danio rerio ENSDARG00000007960 I 0.857
LOC100390818 Callithrix jacchus ENSCJAG00000012235 I 0.843
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.814
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.814
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.814
ENSGGOG00000028444 Gorilla gorilla ENSGGOG00000028444 I 0.807
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.803
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.803
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.803
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.803
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.803
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.803
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.803
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.803
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.803
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.803
LOC100060733 Equus caballus ENSECAG00000009344 I 0.803
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.803
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.803
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.803
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.803
HNRNPD Homo sapiens ENSG00000138668 I 0.803
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.803
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.800
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.797
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.797
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.797
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.797
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.797
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.797
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.797
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.797
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.797
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.797
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.796
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.796
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.794
HNRNPD Sorex araneus ENSSARG00000006883 I 0.794
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.793
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.790
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.790
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.790
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.789
AAH97855 Xenopus laevis AAH97855 I 0.789
AAU25946 Xenopus laevis AAU25946 I 0.789
HNRNPAB Oryzias latipes ENSORLG00000015501 I 0.787
HNRNPAB Tetraodon nigroviridis ENSTNIG00000007596 I 0.786
HNRNPAB Sus scrofa ENSSSCG00000001932 I 0.780
HNRNPAB Takifugu rubripes ENSTRUG00000008411 I 0.779
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.768
hnrnpd Danio rerio ENSDARG00000059246 I 0.761
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.752
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.745
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.732
HNRNPAB Tursiops truncatus ENSTTRG00000010604 I 0.729
HNRNPD Gasterosteus aculeatus ENSGACG00000015669 N 0.727
HNRNPD Tupaia belangeri ENSTBEG00000002327 N 0.720
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.707
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.707
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.707
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.707
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.707
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.707
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.707
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.707
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.707
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.707
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.707
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.707
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.707
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.707
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.707
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.707
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.707
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.707
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.707
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.707
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.707
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.707
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.707
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.707
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.707
HNRPDL Homo sapiens ENSG00000152795 I 0.707
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.707
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.700
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.700
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.700
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.700
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.700
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.700