LOC100053790 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000008833 T36589_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000006962 RRM 1 49
ENSECAP00000006962 RRM 312 382
ENSECAP00000006962 RRM 415 482
ENSECAP00000006962 RRM 494 558
ENSECAP00000007032 RRM 1 49
ENSECAP00000007032 RRM 312 382
ENSECAP00000007032 RRM 415 482
ENSECAP00000007032 RRM 494 558
ENSECAP00000007043 RRM 1 49
ENSECAP00000007043 RRM 314 384
ENSECAP00000007043 RRM 417 484
ENSECAP00000007043 RRM 496 560

Links

Other RRM family RBPs
Other Equus caballus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPEN Anolis carolinensis ENSACAG00000013761 N 0.960
Spen Mus musculus ENSMUSG00000040761 N 0.919
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.823
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.912
SPEN Ochotona princeps ENSOPRG00000015800 N 0.976
SPEN Oryzias latipes ENSORLG00000018414 N 0.819
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.923
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.936
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.923
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.915
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.921
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.980
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.845
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.823
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.849
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.815
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.968
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.953
SPEN Monodelphis domestica ENSMODG00000003411 N 0.942
SPEN Macaca mulatta ENSMMUG00000008026 N 0.919
SPEN Bos taurus ENSBTAG00000018729 N 0.926
SPEN Canis familiaris ENSCAFG00000016132 N 0.945
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.926
SPEN Cavia porcellus ENSCPOG00000014036 N 0.949
spen Danio rerio ENSDARG00000074245 N 0.745
SPEN Danio rerio ENSDARG00000074332 N 0.815
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.807
SPEN Homo sapiens ENSG00000065526 N 0.923
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.823
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.845
SPEN Gallus gallus ENSGALG00000003662 N 0.908
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.923
SPEN Loxodonta africana ENSLAFG00000004524 N 0.996
SPEN Macropus eugenii ENSMEUG00000002422 N 0.794
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.908
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.769
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.992