HNRNPR (Macropus eugenii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMEUG00000003769 T38177_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.825
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.761
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.721
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000003441 RRM 167 229
ENSMEUP00000003441 RRM 274 318
ENSMEUP00000003441 RRM 346 408

Links

Other RRM family RBPs
Other Macropus eugenii RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.761
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.825
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.721
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.721
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.988
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.830
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.726
AAI61702 Xenopus laevis AAI61702 I 0.756
HNRNPR Pan troglodytes ENSPTRG00000000324 I 0.818
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.726
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.725
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.764
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.803
SYNCRIP Otolemur garnettii ENSOGAG00000001721 I 0.854
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 0.814
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.726
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.721
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.825
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.830
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.726
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 0.818
AAH70529 Xenopus laevis AAH70529 I 0.726
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.726
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.830
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.726
HNRNPR Tursiops truncatus ENSTTRG00000007752 I 0.739
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.726
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.709
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.733
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.736
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.825
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 0.818
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.726
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.726
HNRNPR Sorex araneus ENSSARG00000001732 I 0.818
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.830
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.731
Syncrip Mus musculus ENSMUSG00000032423 I 0.731
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.726
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.835
HNRNPR Erinaceus europaeus ENSEEUG00000010120 I 0.788
HNRNPR Equus caballus ENSECAG00000013733 I 0.830
Syncrip Dipodomys ordii ENSDORG00000005217 I 0.854
SYNCRIP Dasypus novemcinctus ENSDNOG00000018345 I 0.830
syncrip Danio rerio ENSDARG00000040184 I 0.721
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.726
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.830
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.726
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.722
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.830
HNRNPR Choloepus hoffmanni ENSCHOG00000005090 I 0.818
HNRNPR Canis familiaris ENSCAFG00000013308 I 0.814
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.726
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.830
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.726
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.825
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.726
HNRNPR Homo sapiens ENSG00000125944 I 0.830
SYNCRIP Homo sapiens ENSG00000135316 I 0.726
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.726
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.726
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.830
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.795
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.726
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.726
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.726
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.825
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.726
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.830
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.830
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.726
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.726
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.726
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.714
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.741
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.721