HNRNPR (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000005090 T35277_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.961
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.907
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.838
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000004508 RRM 167 235
ENSCHOP00000004508 RRM 248 318
ENSCHOP00000004508 RRM 346 408

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPR Pan troglodytes ENSPTRG00000000324 I 1.000
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 1.000
HNRNPR Homo sapiens ENSG00000125944 I 1.000
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 1.000
HNRNPR Sorex araneus ENSSARG00000001732 I 1.000
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 1.000
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.995
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.990
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 0.990
HNRNPR Canis familiaris ENSCAFG00000013308 I 0.990
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.985
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.985
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.985
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.985
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.985
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.985
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.985
HNRNPR Equus caballus ENSECAG00000013733 I 0.985
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.985
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.985
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.975
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.966
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.961
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.961
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.961
HNRNPR Erinaceus europaeus ENSEEUG00000010120 I 0.951
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.931
HNRNPR Tursiops truncatus ENSTTRG00000007752 I 0.921
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.907
AAI61702 Xenopus laevis AAI61702 I 0.897
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.878
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.863
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.844
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.839
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.839
AAH70529 Xenopus laevis AAH70529 I 0.839
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.839
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.839
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.839
Syncrip Mus musculus ENSMUSG00000032423 I 0.839
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.834
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.834
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.834
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.834
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.834
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.834
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.834
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.834
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.834
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.834
SYNCRIP Homo sapiens ENSG00000135316 I 0.834
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.834
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.834
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.834
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.834
syncrip Danio rerio ENSDARG00000040184 I 0.834
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.834
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.834
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.834
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.834
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.834
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.834
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.834
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.834
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.829
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.829
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.829
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.825
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.824
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.824
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.818
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.818
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.816
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.816
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.811
syncripl Danio rerio ENSDARG00000026723 I 0.806
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.806
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.806
ENSRNOG00000033356 Rattus norvegicus ENSRNOG00000033356 I 0.786
HNRNPR Felis catus ENSFCAG00000019123 I 0.744
SYNCRIP Otolemur garnettii ENSOGAG00000001721 I 0.714
Syncrip Dipodomys ordii ENSDORG00000005217 I 0.714