CELF5 (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000015513 T38928_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000009027 RRM 21 60
ENSMMUP00000009027 RRM 258 328
ENSMMUP00000020356 RRM 21 60
ENSMMUP00000020356 RRM 307 377
ENSMMUP00000020358 RRM 30 69
ENSMMUP00000020358 RRM 281 318
ENSMMUP00000031975 RRM 176 246
ENSMMUP00000031976 RRM 29 76
ENSMMUP00000031976 RRM 297 367

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
bru-3 Drosophila melanogaster FBgn0262350 D 0.700
BRUNOL6 Homo sapiens ENSG00000140488 D 0.859
BGIBMGA005893 Bombyx mori BGIBMGA005893 I 0.944
GM26796 Drosophila sechellia FBgn0181649 I 0.761
GM24582 Drosophila sechellia FBgn0179445 I 0.700
GL21647 Drosophila persimilis FBgn0159240 I 0.705
GI17947 Drosophila mojavensis FBgn0140687 I 0.746
GG23781 Drosophila erecta FBgn0115920 I 0.761
GG13757 Drosophila erecta FBgn0106020 I 0.700
GF19661 Drosophila ananassae FBgn0096668 I 0.761
GF10965 Drosophila ananassae FBgn0088005 I 0.700
ENSXETG00000021745 Xenopus tropicalis ENSXETG00000021745 I 0.873
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.736
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.707
GD12651 Drosophila simulans FBgn0184378 I 0.700
GD23834 Drosophila simulans FBgn0195204 I 0.761
GK17101 Drosophila willistoni FBgn0219100 I 0.707
NCBI_GNO_268900001 Daphnia pulex NCBI_GNO_268900001 I 0.944
gw1.77.52.1 Daphnia pulex gw1.77.52.1 I 0.944
fgenesh2_pm.scaffold_186000008 Branchiostoma floridae fgenesh2_pm.scaffold_186000008 I 0.915
e_gw.982.9.1 Nematostella vectensis e_gw.982.9.1 I 0.732
136083 Helobdella robusta 136083 I 0.789
SNAPOd2T00007754001 Oikopleura dioica SNAPOd2T00007754001 I 0.746
PHUM315130 Pediculus humanus PHUM315130 I 0.714
ISCW010799 Ixodes scapularis ISCW010799 I 0.915
ISCW008885 Ixodes scapularis ISCW008885 I 0.761
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.700
GE20053 Drosophila yakuba FBgn0237378 I 0.700
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.736
CELF3 Tetraodon nigroviridis ENSTNIG00000001919 I 0.901
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.714
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.707
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.700
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.729
CELF3 Homo sapiens ENSG00000159409 I 0.859
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.793
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.817
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.800
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.750
CELF6 Anolis carolinensis ENSACAG00000006079 I 0.915
AAEL003979 Aedes aegypti AAEL003979 I 0.915
amel4_ncbi_hmm2201 Apis mellifera amel4_ncbi_hmm2201 I 0.803
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.714
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.794
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.707
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.723
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.700
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.859
CELF6 Oryzias latipes ENSORLG00000013392 I 0.707
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.779
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.915
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.771
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.707
HEXA Macaca mulatta ENSMMUG00000010687 I 0.859
WUBG_04928 Wuchereria bancrofti WUBG_04928 I 0.859
CELF3 Ornithorhynchus anatinus ENSOANG00000004406 N 0.726
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.758