Tardbp (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000041459 T39355_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.917
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000038113 RRM 106 174
ENSMUSP00000038113 RRM 193 244
ENSMUSP00000060538 RRM 106 174
ENSMUSP00000060538 RRM 193 244
ENSMUSP00000081142 RRM 106 174
ENSMUSP00000081142 RRM 193 244
ENSMUSP00000093386 RRM 106 174
ENSMUSP00000093386 RRM 193 244
ENSMUSP00000101324 RRM 106 174
ENSMUSP00000101324 RRM 193 244
ENSMUSP00000101325 RRM 106 174
ENSMUSP00000101325 RRM 193 244

Links

Other RRM family RBPs
Other Mus musculus RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TARDBP Homo sapiens ENSG00000120948 D 0.917
AAM33247 Xenopus laevis AAM33247 I 0.934
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.942
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.959
Tardbp Rattus norvegicus ENSRNOG00000012455 I 1.000
XR_021519.1 Pan troglodytes ENSPTRG00000000136 I 0.917
ENSPPYG00000001894 Pongo pygmaeus ENSPPYG00000001894 I 0.917
TARDBP Procavia capensis ENSPCAG00000010442 I 0.967
TARDBP Oryzias latipes ENSORLG00000005188 I 0.851
TARDBP Oryzias latipes ENSORLG00000003593 I 0.884
TARDBP Ochotona princeps ENSOPRG00000006352 I 0.967
TARDBP Otolemur garnettii ENSOGAG00000016721 I 0.705
ENSOCUG00000004049 Oryctolagus cuniculus ENSOCUG00000004049 I 0.967
TARDBP Tetraodon nigroviridis ENSTNIG00000014758 I 0.851
TARDBP Tetraodon nigroviridis ENSTNIG00000015173 I 0.852
AAH44271 Xenopus laevis AAH44271 I 0.893
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.959
estExt_Genewise1Plus.C_8190002 Capitella teleta estExt_Genewise1Plus.C_8190002 I 0.726
e_gw.96.287.1 Branchiostoma floridae e_gw.96.287.1 I 0.728
e_gw1.17.468.1 Lottia gigantea e_gw1.17.468.1 I 0.748
PHUM575260 Pediculus humanus PHUM575260 I 0.703
tardbp Xenopus tropicalis ENSXETG00000006317 I 0.934
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.959
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.959
TARDBP Tarsius syrichta ENSTSYG00000004077 I 0.975
TARDBP Takifugu rubripes ENSTRUG00000012070 I 0.861
TARDBP Takifugu rubripes ENSTRUG00000012063 I 0.851
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.959
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.959
LOC100051482 Equus caballus ENSECAG00000008338 I 0.959
Tardbp Dipodomys ordii ENSDORG00000007465 I 0.959
TARDBP Dasypus novemcinctus ENSDNOG00000008531 I 0.967
tardbp Danio rerio ENSDARG00000040031 I 0.762
tardbpl Danio rerio ENSDARG00000004452 I 0.893
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.950
LOC100405373 Callithrix jacchus ENSCJAG00000002381 I 0.942
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.959
Q2KJ45_BOVIN Bos taurus ENSBTAG00000003697 I 0.967
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.934
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.738
TARDBP Echinops telfairi ENSETEG00000004358 I 0.959
TARDBP Felis catus ENSFCAG00000000050 I 0.975
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.959
ENSMMUG00000007456 Macaca mulatta ENSMMUG00000007456 I 0.917
ENSMMUG00000003940 Macaca mulatta ENSMMUG00000003940 I 0.730
TARDBP Myotis lucifugus ENSMLUG00000004263 I 0.926
TARDBP Microcebus murinus ENSMICG00000003838 I 0.713
TARDBP Meleagris gallopavo ENSMGAG00000004637 I 0.950
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.959
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.959
TADBP_CHICK Gallus gallus ENSGALG00000002906 I 0.950
TARDBP Gasterosteus aculeatus ENSGACG00000012164 I 0.876
TARDBP Gasterosteus aculeatus ENSGACG00000007124 I 0.852
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.746
TARDBP Pteropus vampyrus ENSPVAG00000014773 N 0.721