TARDBP (Ochotona princeps)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOPRG00000006352 T39971_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.934
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000005818 RRM 106 174
ENSOPRP00000005818 RRM 193 244

Links

Other RRM family RBPs
Other Ochotona princeps RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TARDBP Homo sapiens ENSG00000120948 D 0.934
AAM33247 Xenopus laevis AAM33247 I 0.942
TARDBP Tetraodon nigroviridis ENSTNIG00000015173 I 0.869
TARDBP Tetraodon nigroviridis ENSTNIG00000014758 I 0.876
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.975
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.992
Tardbp Rattus norvegicus ENSRNOG00000012455 I 0.967
XR_021519.1 Pan troglodytes ENSPTRG00000000136 I 0.934
ENSPPYG00000001894 Pongo pygmaeus ENSPPYG00000001894 I 0.934
TARDBP Procavia capensis ENSPCAG00000010442 I 0.967
TARDBP Oryzias latipes ENSORLG00000005188 I 0.876
TARDBP Oryzias latipes ENSORLG00000003593 I 0.909
TARDBP Otolemur garnettii ENSOGAG00000016721 I 0.738
TARDBP Takifugu rubripes ENSTRUG00000012063 I 0.876
TARDBP Takifugu rubripes ENSTRUG00000012070 I 0.861
AAH44271 Xenopus laevis AAH44271 I 0.901
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.992
estExt_Genewise1Plus.C_8190002 Capitella teleta estExt_Genewise1Plus.C_8190002 I 0.734
e_gw.96.287.1 Branchiostoma floridae e_gw.96.287.1 I 0.728
e_gw1.17.468.1 Lottia gigantea e_gw1.17.468.1 I 0.756
170286 Helobdella robusta 170286 I 0.702
PHUM575260 Pediculus humanus PHUM575260 I 0.703
GK15864 Drosophila willistoni FBgn0217867 I 0.705
tardbp Xenopus tropicalis ENSXETG00000006317 I 0.942
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.992
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.992
TARDBP Tarsius syrichta ENSTSYG00000004077 I 0.992
ENSOCUG00000004049 Oryctolagus cuniculus ENSOCUG00000004049 I 0.983
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.992
Tardbp Mus musculus ENSMUSG00000041459 I 0.967
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.992
LOC100051482 Equus caballus ENSECAG00000008338 I 0.992
Tardbp Dipodomys ordii ENSDORG00000007465 I 0.959
TARDBP Dasypus novemcinctus ENSDNOG00000008531 I 0.983
tardbp Danio rerio ENSDARG00000040031 I 0.785
tardbpl Danio rerio ENSDARG00000004452 I 0.917
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.967
LOC100405373 Callithrix jacchus ENSCJAG00000002381 I 0.959
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.992
Q2KJ45_BOVIN Bos taurus ENSBTAG00000003697 I 1.000
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.967
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.754
TARDBP Echinops telfairi ENSETEG00000004358 I 0.975
TARDBP Felis catus ENSFCAG00000000050 I 0.975
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.992
ENSMMUG00000007456 Macaca mulatta ENSMMUG00000007456 I 0.934
ENSMMUG00000003940 Macaca mulatta ENSMMUG00000003940 I 0.746
TARDBP Myotis lucifugus ENSMLUG00000004263 I 0.959
TARDBP Microcebus murinus ENSMICG00000003838 I 0.746
TARDBP Meleagris gallopavo ENSMGAG00000004637 I 0.967
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.992
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.992
TADBP_CHICK Gallus gallus ENSGALG00000002906 I 0.967
TARDBP Gasterosteus aculeatus ENSGACG00000012164 I 0.901
TARDBP Gasterosteus aculeatus ENSGACG00000007124 I 0.869
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.762
TARDBP Pteropus vampyrus ENSPVAG00000014773 N 0.738