CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CELF1
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000005140
T41719_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000004424
RRM
18
58
MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQS
ENSTBEP00000004424
RRM
110
178
LFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCS
ENSTBEP00000004424
RRM
403
473
LFIYHLPQKFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
80 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.778
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.759
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.778
CELF1
Otolemur garnettii
ENSOGAG00000011600
N
0.829
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.778
CELF1
Sorex araneus
ENSSARG00000003207
N
0.711
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.778
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.778
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.801
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
0.834
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.775
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.844
CELF1
Pan troglodytes
ENSPTRG00000003568
N
0.711
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.861
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.778
CELF2
Oryzias latipes
ENSORLG00000003894
N
0.714
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.815
CELF2
Procavia capensis
ENSPCAG00000010882
N
0.901
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.778
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.844
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.778
CELF2
Tetraodon nigroviridis
ENSTNIG00000016009
N
0.723
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.777
Q6PF35
Xenopus laevis
Q6PF35
N
0.787
O57406
Xenopus laevis
O57406
N
0.796
ACH69783
Xenopus laevis
ACH69783
N
0.753
AAI08575
Xenopus laevis
AAI08575
N
0.796
AAH70706
Xenopus laevis
AAH70706
N
0.787
AAH57743
Xenopus laevis
AAH57743
N
0.787
AAH45035
Xenopus laevis
AAH45035
N
0.774
AAC41243
Xenopus laevis
AAC41243
N
0.796
AAB09041
Xenopus laevis
AAB09041
N
0.774
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.778
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.853
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.774
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.853
CELF2
Tursiops truncatus
ENSTTRG00000014665
N
0.879
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.853
CELF2
Takifugu rubripes
ENSTRUG00000016905
N
0.723
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.778
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.774
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.778
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.853
CELF1
Erinaceus europaeus
ENSEEUG00000009782
N
0.711
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.778
CELF1
Equus caballus
ENSECAG00000007741
N
0.853
CELF2
Equus caballus
ENSECAG00000006649
N
0.778
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.839
CELF1
Dasypus novemcinctus
ENSDNOG00000009523
N
0.710
celf1
Danio rerio
ENSDARG00000005315
N
0.777
celf2
Danio rerio
ENSDARG00000002131
N
0.774
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.778
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.853
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.853
CELF1
Choloepus hoffmanni
ENSCHOG00000004196
N
0.708
CELF2
Choloepus hoffmanni
ENSCHOG00000002945
N
0.737
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.853
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.778
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.853
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.778
CELF2
Homo sapiens
ENSG00000048740
N
0.778
CELF1
Homo sapiens
ENSG00000149187
N
0.853
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.839
Celf1
Mus musculus
ENSMUSG00000005506
N
0.844
Celf2
Mus musculus
ENSMUSG00000002107
N
0.778
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.844
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.853
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.778
CELF1
Myotis lucifugus
ENSMLUG00000016631
N
0.703
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.778
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.801
CELF1
Meleagris gallopavo
ENSMGAG00000010629
N
0.834
CELF2
Macropus eugenii
ENSMEUG00000015276
N
0.896
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.844
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.778
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.853
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
0.834
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.778
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.728
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.844