Glyma10g30900.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma10g30900.1 T52767_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		0.775
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma10g30900.1 RRM 142 212

Links

Other RRM family RBPs
Other Glycine max RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TNRC6B Microcebus murinus ENSMICG00000014056 N 0.000
TNRC6C Otolemur garnettii ENSOGAG00000007197 N 0.000
TNRC6A Ochotona princeps ENSOPRG00000005819 N 0.000
TNRC6B Ochotona princeps ENSOPRG00000012054 N 0.000
TNRC6B Oryzias latipes ENSORLG00000002794 N 0.000
TNRC6C Oryzias latipes ENSORLG00000003327 N 0.000
TNRC6C Oryzias latipes ENSORLG00000009837 N 0.000
TNRC6A Oryzias latipes ENSORLG00000012798 N 0.000
TNRC6C Procavia capensis ENSPCAG00000012510 N 0.000
ENSPPYG00000007202 Pongo pygmaeus ENSPPYG00000007202 N 0.000
ENSPPYG00000008679 Pongo pygmaeus ENSPPYG00000008679 N 0.000
ENSPPYG00000011849 Pongo pygmaeus ENSPPYG00000011849 N 0.000
TNRC6C Pan troglodytes ENSPTRG00000009699 N 0.000
TNRC6B Oryctolagus cuniculus ENSOCUG00000016128 N 0.000
TNRC6A Oryctolagus cuniculus ENSOCUG00000004325 N 0.000
TNRC6C Ornithorhynchus anatinus ENSOANG00000009758 N 0.000
TNRC6A Myotis lucifugus ENSMLUG00000002701 N 0.000
TNRC6B Myotis lucifugus ENSMLUG00000008765 N 0.000
TNRC6C Macaca mulatta ENSMMUG00000011924 N 0.000
TNRC6A Macaca mulatta ENSMMUG00000020428 N 0.000
TNRC6B Macaca mulatta ENSMMUG00000021345 N 0.000
TNRC6C Monodelphis domestica ENSMODG00000001785 N 0.000
TNRC6B Monodelphis domestica ENSMODG00000008960 N 0.000
TNRC6A Monodelphis domestica ENSMODG00000016348 N 0.000
Tnrc6c Mus musculus ENSMUSG00000025571 N 0.000
Tnrc6b Mus musculus ENSMUSG00000047888 N 0.000
Tnrc6a Mus musculus ENSMUSG00000052707 N 0.000
TNRC6A Ornithorhynchus anatinus ENSOANG00000007672 N 0.000
XR_024166.1 Pan troglodytes ENSPTRG00000014406 N 0.000
TNRC6B Pteropus vampyrus ENSPVAG00000004975 N 0.000
TNRC6C Takifugu rubripes ENSTRUG00000012583 N 0.000
TNRC6B Takifugu rubripes ENSTRUG00000016987 N 0.000
TNRC6B Tarsius syrichta ENSTSYG00000011836 N 0.000
TNRC6A Tarsius syrichta ENSTSYG00000012711 N 0.000
TNRC6A Tursiops truncatus ENSTTRG00000002008 N 0.000
TNRC6C Tursiops truncatus ENSTTRG00000010828 N 0.000
TNRC6B Tursiops truncatus ENSTTRG00000011465 N 0.000
tnrc6c Xenopus tropicalis ENSXETG00000019470 N 0.000
estExt_fgenesh2_pg.C_4930048 Branchiostoma floridae estExt_fgenesh2_pg.C_4930048 N 0.000
estExt_fgenesh2_pg.C_5340004 Branchiostoma floridae estExt_fgenesh2_pg.C_5340004 N 0.000
PASA_GEN_0100279 Daphnia pulex PASA_GEN_0100279 N 0.000
Ame_R002380 Ailuropoda melanoleuca Ame_R002380 N 0.000
TNRC6C Takifugu rubripes ENSTRUG00000011685 N 0.000
TNRC6A Takifugu rubripes ENSTRUG00000009839 N 0.000
TNRC6C Tetraodon nigroviridis ENSTNIG00000005273 N 0.000
Tnrc6a Rattus norvegicus ENSRNOG00000024737 N 0.000
Tnrc6b Rattus norvegicus ENSRNOG00000024907 N 0.000
TNRC6B Sorex araneus ENSSARG00000007971 N 0.000
TNRC6B Sus scrofa ENSSSCG00000000078 N 0.000
TNRC6B Spermophilus tridecemlineatus ENSSTOG00000008927 N 0.000
TNRC6A Tupaia belangeri ENSTBEG00000014965 N 0.000
TNRC6B Tupaia belangeri ENSTBEG00000017272 N 0.000
TNRC6A Taeniopygia guttata ENSTGUG00000006142 N 0.000
TNRC6C Taeniopygia guttata ENSTGUG00000007733 N 0.000
TNRC6B Taeniopygia guttata ENSTGUG00000010128 N 0.000
ENSTGUG00000010138 Taeniopygia guttata ENSTGUG00000010138 N 0.000
TNRC6C Tetraodon nigroviridis ENSTNIG00000004178 N 0.000
Ame_R006400 Ailuropoda melanoleuca Ame_R006400 N 0.000
AGAP007802 Anopheles gambiae AGAP007802 N 0.000
TNRC6B Cavia porcellus ENSCPOG00000005705 N 0.000
TNRC6B Danio rerio ENSDARG00000074161 N 0.000
TNRC6C Danio rerio ENSDARG00000076356 N 0.000
TNRC6B Danio rerio ENSDARG00000076389 N 0.000
TNRC6C Danio rerio ENSDARG00000076847 N 0.000
TNRC6C Danio rerio ENSDARG00000078036 N 0.000
TNRC6A Danio rerio ENSDARG00000079688 N 0.000
TNRC6C Dasypus novemcinctus ENSDNOG00000003247 N 0.000
TNRC6B Dasypus novemcinctus ENSDNOG00000012744 N 0.000
Tnrc6b Dipodomys ordii ENSDORG00000003386 N 0.000
Tnrc6a Dipodomys ordii ENSDORG00000014734 N 0.000
TNRC6B Equus caballus ENSECAG00000009759 N 0.000
TNRC6C Cavia porcellus ENSCPOG00000000467 N 0.000
ENSCJAG00000031596 Callithrix jacchus ENSCJAG00000031596 N 0.000
TNRC6A Callithrix jacchus ENSCJAG00000020677 N 0.000
TNRC6B Anolis carolinensis ENSACAG00000007281 N 0.000
TNRC6A Anolis carolinensis ENSACAG00000011857 N 0.000
TNRC6C Anolis carolinensis ENSACAG00000016198 N 0.000
TNRC6A Bos taurus ENSBTAG00000017999 N 0.000
TNRC6C Bos taurus ENSBTAG00000018658 N 0.000
TNRC6B Bos taurus ENSBTAG00000021076 N 0.000
TNRC6B Canis familiaris ENSCAFG00000001255 N 0.000
TNRC6C Canis familiaris ENSCAFG00000005224 N 0.000
TNRC6A Canis familiaris ENSCAFG00000017531 N 0.000
TNRC6A Choloepus hoffmanni ENSCHOG00000009374 N 0.000
TNRC6B Choloepus hoffmanni ENSCHOG00000010004 N 0.000
TNRC6C Callithrix jacchus ENSCJAG00000019431 N 0.000
LOC100058134 Equus caballus ENSECAG00000012486 N 0.000
TNRC6A Equus caballus ENSECAG00000025056 N 0.000
TNRC6A Gorilla gorilla ENSGGOG00000005137 N 0.000
TNRC6B Gorilla gorilla ENSGGOG00000008444 N 0.000
TNRC6C Gorilla gorilla ENSGGOG00000011304 N 0.000
TNRC6A Loxodonta africana ENSLAFG00000004209 N 0.000
TNRC6C Loxodonta africana ENSLAFG00000011122 N 0.000
TNRC6B Loxodonta africana ENSLAFG00000014473 N 0.000
TNRC6C Macropus eugenii ENSMEUG00000005104 N 0.000
TNRC6A Macropus eugenii ENSMEUG00000015959 N 0.000
TNRC6C Meleagris gallopavo ENSMGAG00000003906 N 0.000
TNRC6A Meleagris gallopavo ENSMGAG00000006455 N 0.000
TNRC6B Meleagris gallopavo ENSMGAG00000012333 N 0.000
TNRC6A Microcebus murinus ENSMICG00000001883 N 0.000
TNRC6B Gallus gallus ENSGALG00000012050 N 0.000
TNRC6A Gallus gallus ENSGALG00000006068 N 0.000
TNRC6C Gallus gallus ENSGALG00000001725 N 0.000
TNRC6B Erinaceus europaeus ENSEEUG00000008690 N 0.000
TNRC6C Echinops telfairi ENSETEG00000005527 N 0.000
TNRC6A Echinops telfairi ENSETEG00000014658 N 0.000
TNRC6C Felis catus ENSFCAG00000013005 N 0.000
TNRC6C Homo sapiens ENSG00000078687 N 0.000
TNRC6A Homo sapiens ENSG00000090905 N 0.000
TNRC6B Homo sapiens ENSG00000100354 N 0.000
TNRC6B Gasterosteus aculeatus ENSGACG00000004573 N 0.000
TNRC6B Gasterosteus aculeatus ENSGACG00000007421 N 0.000
TNRC6C Gasterosteus aculeatus ENSGACG00000012320 N 0.000
TNRC6A Gasterosteus aculeatus ENSGACG00000014332 N 0.000
TNRC6C Gasterosteus aculeatus ENSGACG00000019401 N 0.000
TNRC6C Microcebus murinus ENSMICG00000003952 N 0.000