GRMZM2G068255 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G068255 T54068_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		0.761
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G068255_P01 RRM 131 201

Links

Other RRM family RBPs
Other Zea mays RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSXETG00000017599 Xenopus tropicalis ENSXETG00000017599 D 0.746
RBM42 Homo sapiens ENSG00000126254 D 0.761
AAI29698 Xenopus laevis AAI29698 I 0.746
RBM42 Spermophilus tridecemlineatus ENSSTOG00000013050 I 0.761
RBM42 Sus scrofa ENSSSCG00000002905 I 0.761
RBM42 Sorex araneus ENSSARG00000010724 I 0.761
Rbm42 Rattus norvegicus ENSRNOG00000024278 I 0.761
RBM42 Pteropus vampyrus ENSPVAG00000012815 I 0.761
RBM42 Pan troglodytes ENSPTRG00000010852 I 0.761
ENSPPYG00000009871 Pongo pygmaeus ENSPPYG00000009871 I 0.761
RBM42 Procavia capensis ENSPCAG00000013053 I 0.761
RBM42 Oryzias latipes ENSORLG00000003387 I 0.761
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.761
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.761
RBM42 Tarsius syrichta ENSTSYG00000014688 I 0.761
A2VDB3 Xenopus laevis A2VDB3 I 0.746
XP_002167334.1 Hydra magnipapillata XP_002167334.1 I 0.000
Minc13155 Meloidogyne incognita Minc13155 I 0.000
Ame_R009099 Ailuropoda melanoleuca Ame_R009099 I 0.761
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.732
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.732
e_gw.92.129.1 Nematostella vectensis e_gw.92.129.1 I 0.000
e_gw1.16.225.1 Lottia gigantea e_gw1.16.225.1 I 0.000
tag-262 Caenorhabditis elegans Y54H5A.3 I 0.000
Ppa-tag-262 Pristionchus pacificus PPA14507 I 0.000
RBM42 Ochotona princeps ENSOPRG00000001229 I 0.761
RBM42 Otolemur garnettii ENSOGAG00000004144 I 0.761
RBM42 Oryctolagus cuniculus ENSOCUG00000003337 I 0.761
RBM42 Canis familiaris ENSCAFG00000006925 I 0.761
RBM42_BOVIN Bos taurus ENSBTAG00000013440 I 0.761
RBM42 Anolis carolinensis ENSACAG00000005495 I 0.746
CRE29329 Caenorhabditis remanei CRE29329 I 0.000
CJA09414 Caenorhabditis japonica CJA09414 I 0.000
CBN12017 Caenorhabditis brenneri CBN12017 I 0.000
CBG21313 Caenorhabditis briggsae CBG21313 I 0.000
amel4_ncbi_hmm2520 Apis mellifera amel4_ncbi_hmm2520 I 0.000
WUBG_05387 Wuchereria bancrofti WUBG_05387 I 0.000
LOAG_04208 Loa loa LOAG_04208 I 0.000
RBM42 Callithrix jacchus ENSCJAG00000010220 I 0.761
RBM42 Cavia porcellus ENSCPOG00000012365 I 0.761
rbm42 Danio rerio ENSDARG00000039910 I 0.746
Rbm42 Mus musculus ENSMUSG00000036733 I 0.761
RBM42 Monodelphis domestica ENSMODG00000013957 I 0.761
RBM42 Macaca mulatta ENSMMUG00000018954 I 0.761
RBM42 Myotis lucifugus ENSMLUG00000011334 I 0.761
RBM42 Microcebus murinus ENSMICG00000009880 I 0.761
ENSMEUG00000016300 Macropus eugenii ENSMEUG00000016300 I 0.761
RBM42 Gorilla gorilla ENSGGOG00000009972 I 0.761
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.761
RBM42 Erinaceus europaeus ENSEEUG00000004841 I 0.761
LOC100051102 Equus caballus ENSECAG00000018215 I 0.761
Bm1_40380 Brugia malayi Bm1_40380 I 0.000
estExt_fgenesh2_pg.C_90157 Monosiga brevicollis estExt_fgenesh2_pg.C_90157 N 0.000