PDK_20s1301681g005 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1301681g005 T58031_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		0.746
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1301681g005 RRM 57 127

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCLIV_021850 Neospora caninum NCLIV_021850 N 0.718
TGGT1_017860 Toxoplasma gondii TGGT1_017860 N 0.718
TGME49_003080 Toxoplasma gondii TGME49_003080 N 0.718
TGVEG_046310 Toxoplasma gondii TGVEG_046310 N 0.718
EDO06441.1 Babesia bovis EDO06441.1 N 0.000
TA12210 Theileria annulata TA12210 N 0.000