Smp_108820 (Schistosoma mansoni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Smp_108820 T58654_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Smp_108820 RRM 103 172

Links

Other RRM family RBPs
Other Schistosoma mansoni RBPs

93 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q6GLW1 Xenopus laevis Q6GLW1 N 0.843
Thoc4 Mus musculus ENSMUSG00000025134 N 0.871
Refbp2 Mus musculus ENSMUSG00000060244 N 0.829
Gm5698 Mus musculus ENSMUSG00000086151 N 0.757
Gm5699 Mus musculus ENSMUSG00000087346 N 0.771
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.871
THOC4 Oryzias latipes ENSORLG00000012331 N 0.843
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.871
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.871
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.871
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.871
ENSMLUG00000011212 Myotis lucifugus ENSMLUG00000011212 N 0.714
ENSMLUG00000011599 Myotis lucifugus ENSMLUG00000011599 N 0.729
ENSMLUG00000013041 Myotis lucifugus ENSMLUG00000013041 N 0.729
ENSMLUG00000013085 Myotis lucifugus ENSMLUG00000013085 N 0.729
ENSMLUG00000014480 Myotis lucifugus ENSMLUG00000014480 N 0.729
ENSMLUG00000015043 Myotis lucifugus ENSMLUG00000015043 N 0.743
ENSMLUG00000015142 Myotis lucifugus ENSMLUG00000015142 N 0.700
ENSMLUG00000016194 Myotis lucifugus ENSMLUG00000016194 N 0.743
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.871
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.871
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.757
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.743
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.786
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.871
AAH74336 Xenopus laevis AAH74336 N 0.843
AAH92013 Xenopus laevis AAH92013 N 0.871
Q58EA2 Xenopus laevis Q58EA2 N 0.871
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.757
ISCW001860 Ixodes scapularis ISCW001860 N 0.743
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.871
ENSTBEG00000013201 Tupaia belangeri ENSTBEG00000013201 N 0.000
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.829
ENSTNIG00000014136 Tetraodon nigroviridis ENSTNIG00000014136 N 0.000
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.743
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.757
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.871
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.871
ENSMLUG00000010927 Myotis lucifugus ENSMLUG00000010927 N 0.700
ENSMLUG00000010456 Myotis lucifugus ENSMLUG00000010456 N 0.729
ENSMLUG00000010127 Myotis lucifugus ENSMLUG00000010127 N 0.743
tho4 Danio rerio ENSDARG00000077732 N 0.871
LOC100055097 Equus caballus ENSECAG00000018754 N 0.871
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.800
THOC4 Echinops telfairi ENSETEG00000016596 N 0.871
THOC4 Homo sapiens ENSG00000183684 N 0.871
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.814
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.757
THOC4 Gallus gallus ENSGALG00000007237 N 0.871
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.871
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.786
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.786
AAEL005114 Aedes aegypti AAEL005114 N 0.729
AAEL015263 Aedes aegypti AAEL015263 N 0.729
AGAP006733 Anopheles gambiae AGAP006733 N 0.714
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.729
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.871
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.871
THOC4 Canis familiaris ENSCAFG00000005877 N 0.871
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.871
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.871
ENSMLUG00000007634 Myotis lucifugus ENSMLUG00000007634 N 0.729
ENSMLUG00000008410 Myotis lucifugus ENSMLUG00000008410 N 0.000
ENSMLUG00000008923 Myotis lucifugus ENSMLUG00000008923 N 0.729
ENSMLUG00000009247 Myotis lucifugus ENSMLUG00000009247 N 0.700
ENSMLUG00000009447 Myotis lucifugus ENSMLUG00000009447 N 0.700
ENSMLUG00000009449 Myotis lucifugus ENSMLUG00000009449 N 0.000
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.800
ENSMLUG00000009822 Myotis lucifugus ENSMLUG00000009822 N 0.729
ENSMLUG00000007617 Myotis lucifugus ENSMLUG00000007617 N 0.729
ENSMLUG00000007513 Myotis lucifugus ENSMLUG00000007513 N 0.743
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.871
THOC4 Microcebus murinus ENSMICG00000017403 N 0.871
ENSMLUG00000001217 Myotis lucifugus ENSMLUG00000001217 N 0.729
ENSMLUG00000002626 Myotis lucifugus ENSMLUG00000002626 N 0.729
ENSMLUG00000002669 Myotis lucifugus ENSMLUG00000002669 N 0.729
ENSMLUG00000004521 Myotis lucifugus ENSMLUG00000004521 N 0.729
ENSMLUG00000004992 Myotis lucifugus ENSMLUG00000004992 N 0.729
ENSMLUG00000006641 Myotis lucifugus ENSMLUG00000006641 N 0.700
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.729