AAH97855 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH97855 T59595_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.732
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH97855 RRM 31 100
AAH97855 RRM 116 186

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

106 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPAB Homo sapiens ENSG00000197451 D 0.732
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.944
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.838
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.704
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.908
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.732
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.704
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.950
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.704
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.711
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.950
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.704
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.950
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.704
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.704
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.950
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.739
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.704
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.937
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.704
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.768
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.944
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.704
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.734
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.732
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.732
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.950
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.704
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.950
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.944
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.768
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.979
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.704
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.944
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.725
AAH43814 Xenopus laevis AAH43814 I 0.761
AAH74212 Xenopus laevis AAH74212 I 0.746
AAU25946 Xenopus laevis AAU25946 I 1.000
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.944
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.838
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.711
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.704
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.943
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.739
HNRNPD Sorex araneus ENSSARG00000006883 I 0.929
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.950
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.704
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.704
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.754
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.950
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.838
ABV54637 Xenopus laevis ABV54637 I 0.746
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.789
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.915
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.704
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.704
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.725
hnrnpab Danio rerio ENSDARG00000007960 I 0.732
HNRNPAB Danio rerio ENSDARG00000017568 I 0.746
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.704
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.732
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.704
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.937
LOC100060733 Equus caballus ENSECAG00000009344 I 0.950
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.944
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.704
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.950
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.782
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.725
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.950
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.704
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.718
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.704
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.950
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.937
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.704
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.704
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.725
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.704
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.929
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.704
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.944
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.789
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.704
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.754
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.944
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.704
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.944
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.929
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.725
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.950
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.725
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.950
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.950
HNRNPD Homo sapiens ENSG00000138668 I 0.950
HNRPDL Homo sapiens ENSG00000152795 I 0.704
hnrnpd Danio rerio ENSDARG00000059246 I 0.859
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.732
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.704
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.944
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.754
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.704
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.732
HNRNPD Tupaia belangeri ENSTBEG00000002327 N 0.859
HNRNPD Otolemur garnettii ENSOGAG00000004075 N 0.794
HNRNPD Gasterosteus aculeatus ENSGACG00000015669 N 0.853