PHUM241330 (Pediculus humanus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		PHUM241330 T07406_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		0.795
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		0.795
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM241330-PA RRM 13 78
PHUM241330-PA CCHC ZF 106 122

Links

Other CCHC ZF,RRM family RBPs
Other Pediculus humanus RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL017082 Aedes aegypti AAEL017082 I 0.857
AAH77185 Xenopus laevis AAH77185 I 0.774
AAH77393 Xenopus laevis AAH77393 I 0.774
AGAP008303 Anopheles gambiae AGAP008303 I 0.831
amel4_ncbi_hmm42637 Apis mellifera amel4_ncbi_hmm42637 I 0.857
Ame_R012465 Ailuropoda melanoleuca Ame_R012465 I 0.786
B5FZ53_TAEGU Taeniopygia guttata ENSTGUG00000002095 I 0.783
BGIBMGA010396 Bombyx mori BGIBMGA010396 I 0.880
CPIJ013237 Culex quinquefasciatus CPIJ013237 I 0.855
CpipJ_CPIJ013237 Culex pipiens CpipJ_CPIJ013237 I 0.855
DGIL_AUG5s7527g2t1 Acyrtosiphon pisum DGIL_AUG5s7527g2t1 I 0.857
ENSCAFG00000006272 Canis familiaris ENSCAFG00000006272 I 0.795
ENSCHOG00000002390 Choloepus hoffmanni ENSCHOG00000002390 I 0.747
ENSDARG00000054296 Danio rerio ENSDARG00000054296 I 0.774
ENSGALG00000013825 Gallus gallus ENSGALG00000013825 I 0.711
ENSMEUG00000000773 Macropus eugenii ENSMEUG00000000773 I 0.771
ENSMEUG00000016459 Macropus eugenii ENSMEUG00000016459 I 0.795
ENSMODG00000008669 Monodelphis domestica ENSMODG00000008669 I 0.795
ENSMODG00000023693 Monodelphis domestica ENSMODG00000023693 I 0.771
ENSPPYG00000012480 Pongo pygmaeus ENSPPYG00000012480 I 0.795
ENSRNOG00000025091 Rattus norvegicus ENSRNOG00000025091 I 0.747
ENSRNOG00000033319 Rattus norvegicus ENSRNOG00000033319 I 0.723
estExt_Genewise1.C_1590063 Capitella teleta estExt_Genewise1.C_1590063 I 0.771
e_gw.267.117.1 Branchiostoma floridae e_gw.267.117.1 I 0.762
fgenesh2_pg.scaffold_208000073 Branchiostoma floridae fgenesh2_pg.scaffold_208000073 I 0.762
gw1.10.611.1 Lottia gigantea gw1.10.611.1 I 0.750
ISCW006562 Ixodes scapularis ISCW006562 I 0.810
LOC100054033 Equus caballus ENSECAG00000008664 I 0.795
LOC100385878 Callithrix jacchus ENSCJAG00000015185 I 0.795
PHUM284060 Pediculus humanus PHUM284060 I 0.893
Q5ZMI0_CHICK Gallus gallus ENSGALG00000013819 I 0.783
Sfrs7 Rattus norvegicus ENSRNOG00000027360 I 0.795
SFRS7 Taeniopygia guttata ENSTGUG00000002080 I 0.783
SFRS7_BOVIN Bos taurus ENSBTAG00000014891 I 0.795
Sjc_0048080 Schistosoma japonicum Sjc_0048080 N 0.714
Smp_098890 Schistosoma mansoni Smp_098890 I 0.726
SRSF7 Gasterosteus aculeatus ENSGACG00000012311 I 0.774
SRSF7 Tetraodon nigroviridis ENSTNIG00000014279 I 0.774
SRSF7 Takifugu rubripes ENSTRUG00000010529 I 0.774
SRSF7 Tarsius syrichta ENSTSYG00000012273 I 0.795
SRSF7 Ochotona princeps ENSOPRG00000010234 I 0.795
SRSF7 Tursiops truncatus ENSTTRG00000014324 I 0.723
SRSF7 Vicugna pacos ENSVPAG00000003316 I 0.795
srsf7 Xenopus tropicalis ENSXETG00000025300 I 0.774
SRSF7 Anolis carolinensis ENSACAG00000006082 I 0.795
SRSF7 Tupaia belangeri ENSTBEG00000004604 I 0.795
SRSF7 Sus scrofa ENSSSCG00000008484 I 0.795
SRSF7 Meleagris gallopavo ENSMGAG00000007415 I 0.795
SRSF7 Loxodonta africana ENSLAFG00000005666 I 0.795
SRSF7 Gorilla gorilla ENSGGOG00000014620 I 0.795
SRSF7 Homo sapiens ENSG00000115875 D 0.795
SRSF7 Erinaceus europaeus ENSEEUG00000014487 I 0.795
Srsf7 Dipodomys ordii ENSDORG00000008616 I 0.795
SRSF7 Dasypus novemcinctus ENSDNOG00000007821 I 0.795
SRSF7 Danio rerio ENSDARG00000035325 I 0.750
SRSF7 Macaca mulatta ENSMMUG00000011025 I 0.795
Srsf7 Mus musculus ENSMUSG00000024097 I 0.795
SRSF7 Ornithorhynchus anatinus ENSOANG00000004405 I 0.795
SRSF7 Myotis lucifugus ENSMLUG00000015692 I 0.795
SRSF7 Otolemur garnettii ENSOGAG00000010169 I 0.795
SRSF7 Pteropus vampyrus ENSPVAG00000012076 I 0.795
SRSF7 Pan troglodytes ENSPTRG00000011851 I 0.795
SRSF7 Procavia capensis ENSPCAG00000011348 I 0.795
SRSF7 Oryzias latipes ENSORLG00000000746 I 0.762
SRSF7 Cavia porcellus ENSCPOG00000011785 I 0.795
SRSF7 Oryctolagus cuniculus ENSOCUG00000004087 I 0.795
xl6 Drosophila melanogaster FBgn0028554 N 0.750
XP_001178394.1 Strongylocentrotus purpuratus XP_001178394.1 N 0.702
XP_001178879.1 Strongylocentrotus purpuratus XP_001178879.1 N 0.711
XP_787177.1 Strongylocentrotus purpuratus XP_787177.1 N 0.702
XP_789638.1 Strongylocentrotus purpuratus XP_789638.1 N 0.711