CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DEHA0E14685g
(
Debaryomyces hansenii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
DEHA0E14685g
T17638_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DEHA0E14685g.1
KH
138
187
FVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVV
Links
Other
KH
family RBPs
Other
Debaryomyces hansenii
RBPs
156 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
1.000
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
1.000
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
1.000
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.960
AAH72210
Xenopus laevis
AAH72210
N
0.702
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.820
Aqu1.217752
Amphimedon queenslandica
Aqu1.217752
N
0.745
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.840
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.800
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.780
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.960
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.960
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.920
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.960
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.840
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.800
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.840
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.860
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.804
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.900
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.900
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.820
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.780
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.843
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.960
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.800
fgenesh1_pm.00866_#_279
Aspergillus carbonarius
fgenesh1_pm.00866_#_279
N
0.820
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.760
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.820
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.960
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.943
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.840
KRR1
Sorex araneus
ENSSARG00000009967
N
0.840
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.840
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.840
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.840
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.800
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.840
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.840
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.800
KRR1
Saccharomyces cerevisiae
YCL059C
N
1.000
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.800
KRR1
Candida albicans
orf19.661
N
0.960
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.840
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.820
KRR1
Homo sapiens
ENSG00000111615
N
0.840
KRR1
Felis catus
ENSFCAG00000005207
N
0.840
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.820
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.840
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.840
KRR1
Danio rerio
ENSDARG00000011246
N
0.820
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.840
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.840
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.820
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.840
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.804
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.840
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.840
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.840
KRR1
Procavia capensis
ENSPCAG00000010269
N
0.760
Krr1
Mus musculus
ENSMUSG00000063334
N
0.820
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.840
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.840
KRR1
Myotis lucifugus
ENSMLUG00000002339
N
0.720
KRR1
Microcebus murinus
ENSMICG00000015127
N
0.760
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.714
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.840
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.980
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.960
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.840
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.840
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.840
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.820
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.960
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.880
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.800
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.804
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.800
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
1.000
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
1.000
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.840
UM03241
Ustilago maydis
UM03241
N
0.800
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.820
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.745
XP_002154857.1
Hydra magnipapillata
XP_002154857.1
N
0.720
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.800
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.745
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.840