HDLBP (Sorex araneus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSSARG00000012639 T19484_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000011420 KH 97 142
ENSSARP00000011420 KH 234 282
ENSSARP00000011420 KH 295 355
ENSSARP00000011420 KH 364 422
ENSSARP00000011420 KH 435 457
ENSSARP00000011420 KH 507 568
ENSSARP00000011420 KH 581 641
ENSSARP00000011420 KH 653 714
ENSSARP00000011420 KH 727 788
ENSSARP00000011420 KH 800 861
ENSSARP00000011420 KH 873 962
ENSSARP00000011420 KH 969 1029
ENSSARP00000011420 KH 1049 1072
ENSSARP00000011420 KH 1085 1112
ENSSARP00000011420 KH 1124 1185

Links

Other KH family RBPs
Other Sorex araneus RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44314 Xenopus laevis AAH44314 N 0.706
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.808
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.781
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.797
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.810
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.806
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.806
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.800
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.806
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.712
Hdlbp Mus musculus ENSMUSG00000034088 N 0.808
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.785
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.765
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.801
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.804
HDLBP Felis catus ENSFCAG00000010455 N 0.738
HDLBP Homo sapiens ENSG00000115677 N 0.806
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.806
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.797
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.767
HDLBP Canis familiaris ENSCAFG00000012913 N 0.808
LOC100057882 Equus caballus ENSECAG00000012829 N 0.807
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.768