HDLBP (Oryctolagus cuniculus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOCUG00000012667 T19195_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000010914 KH 98 143
ENSOCUP00000010914 KH 152 212
ENSOCUP00000010914 KH 224 284
ENSOCUP00000010914 KH 297 357
ENSOCUP00000010914 KH 366 424
ENSOCUP00000010914 KH 437 497
ENSOCUP00000010914 KH 509 570
ENSOCUP00000010914 KH 583 643
ENSOCUP00000010914 KH 655 716
ENSOCUP00000010914 KH 729 790
ENSOCUP00000010914 KH 802 863
ENSOCUP00000010914 KH 875 967
ENSOCUP00000010914 KH 974 1034
ENSOCUP00000010914 KH 1054 1117
ENSOCUP00000010914 KH 1129 1190

Links

Other KH family RBPs
Other Oryctolagus cuniculus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.974
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.971
Hdlbp Mus musculus ENSMUSG00000034088 N 0.970
LOC100057882 Equus caballus ENSECAG00000012829 N 0.969
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.967
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.967
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.967
HDLBP Homo sapiens ENSG00000115677 N 0.967
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.967
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.965
HDLBP Canis familiaris ENSCAFG00000012913 N 0.965
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.964
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.961
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.950
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.933
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.924
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.920
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.903
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.902
HDLBP Felis catus ENSFCAG00000010455 N 0.889
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.835
AAH44314 Xenopus laevis AAH44314 N 0.826
hdlbp Danio rerio ENSDARG00000009830 N 0.810
HDLBP Sorex araneus ENSSARG00000012639 N 0.810
HDLBP Oryzias latipes ENSORLG00000002226 N 0.799
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.793
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.787
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.784
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.764
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.744
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.738
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.738
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.728