HDLBP (Ochotona princeps)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOPRG00000011965 T19262_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000010939 KH 98 143
ENSOPRP00000010939 KH 152 212
ENSOPRP00000010939 KH 224 284
ENSOPRP00000010939 KH 297 357
ENSOPRP00000010939 KH 366 424
ENSOPRP00000010939 KH 437 497
ENSOPRP00000010939 KH 509 570
ENSOPRP00000010939 KH 583 643
ENSOPRP00000010939 KH 655 716
ENSOPRP00000010939 KH 729 790
ENSOPRP00000010939 KH 796 857
ENSOPRP00000010939 KH 869 961
ENSOPRP00000010939 KH 968 1028
ENSOPRP00000010939 KH 1048 1111
ENSOPRP00000010939 KH 1123 1184

Links

Other KH family RBPs
Other Ochotona princeps RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.974
LOC100057882 Equus caballus ENSECAG00000012829 N 0.965
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.963
Hdlbp Mus musculus ENSMUSG00000034088 N 0.962
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.958
HDLBP Canis familiaris ENSCAFG00000012913 N 0.958
HDLBP Homo sapiens ENSG00000115677 N 0.958
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.958
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.958
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.957
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.956
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.954
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.950
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.945
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.930
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.921
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.914
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.904
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.903
HDLBP Felis catus ENSFCAG00000010455 N 0.885
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.835
AAH44314 Xenopus laevis AAH44314 N 0.829
hdlbp Danio rerio ENSDARG00000009830 N 0.807
HDLBP Sorex araneus ENSSARG00000012639 N 0.806
HDLBP Oryzias latipes ENSORLG00000002226 N 0.800
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.792
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.788
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.785
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.765
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.747
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.742
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.742
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.734