HDLBP (Monodelphis domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMODG00000016033 T19100_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000020011 KH 99 144
ENSMODP00000020011 KH 153 213
ENSMODP00000020011 KH 225 285
ENSMODP00000020011 KH 298 358
ENSMODP00000020011 KH 367 425
ENSMODP00000020011 KH 438 498
ENSMODP00000020011 KH 510 571
ENSMODP00000020011 KH 584 644
ENSMODP00000020011 KH 656 717
ENSMODP00000020011 KH 730 791
ENSMODP00000020011 KH 803 864
ENSMODP00000020011 KH 876 968
ENSMODP00000020011 KH 975 1035
ENSMODP00000020011 KH 1056 1119
ENSMODP00000020011 KH 1131 1192
ENSMODP00000034634 KH 99 144
ENSMODP00000034634 KH 153 213
ENSMODP00000034634 KH 225 285
ENSMODP00000034634 KH 298 358
ENSMODP00000034634 KH 367 425
ENSMODP00000034634 KH 438 498
ENSMODP00000034634 KH 510 571
ENSMODP00000034634 KH 584 644
ENSMODP00000034634 KH 656 717
ENSMODP00000034634 KH 730 791
ENSMODP00000034634 KH 803 864
ENSMODP00000034634 KH 876 968
ENSMODP00000034634 KH 975 1035
ENSMODP00000034634 KH 1059 1122
ENSMODP00000034634 KH 1134 1195

Links

Other KH family RBPs
Other Monodelphis domestica RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.953
HDLBP Canis familiaris ENSCAFG00000012913 N 0.940
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.939
Hdlbp Mus musculus ENSMUSG00000034088 N 0.939
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.938
LOC100057882 Equus caballus ENSECAG00000012829 N 0.938
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.937
HDLBP Homo sapiens ENSG00000115677 N 0.937
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.937
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.937
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.937
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.935
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.933
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.933
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.933
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.930
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.929
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.922
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.893
HDLBP Felis catus ENSFCAG00000010455 N 0.865
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.846
AAH44314 Xenopus laevis AAH44314 N 0.840
hdlbp Danio rerio ENSDARG00000009830 N 0.825
HDLBP Oryzias latipes ENSORLG00000002226 N 0.809
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.806
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.799
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.798
HDLBP Sorex araneus ENSSARG00000012639 N 0.785
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.770
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.747
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.740
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.738
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.728