HDLBP (Meleagris gallopavo)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMGAG00000003686 T18975_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000003482 KH 98 142
ENSMGAP00000003482 KH 151 211
ENSMGAP00000003482 KH 223 283
ENSMGAP00000003482 KH 296 356
ENSMGAP00000003482 KH 365 423
ENSMGAP00000003482 KH 436 496
ENSMGAP00000003482 KH 508 569
ENSMGAP00000003482 KH 582 642
ENSMGAP00000003482 KH 654 715
ENSMGAP00000003482 KH 728 789
ENSMGAP00000003482 KH 801 862
ENSMGAP00000003482 KH 874 966
ENSMGAP00000003482 KH 973 1033
ENSMGAP00000003482 KH 1053 1116
ENSMGAP00000003482 KH 1128 1189

Links

Other KH family RBPs
Other Meleagris gallopavo RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.999
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.947
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.938
HDLBP Canis familiaris ENSCAFG00000012913 N 0.913
LOC100057882 Equus caballus ENSECAG00000012829 N 0.911
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.910
Hdlbp Mus musculus ENSMUSG00000034088 N 0.910
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.909
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.909
HDLBP Homo sapiens ENSG00000115677 N 0.907
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.907
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.905
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.904
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.903
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.903
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.902
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.899
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.893
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.871
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.860
AAH44314 Xenopus laevis AAH44314 N 0.852
HDLBP Felis catus ENSFCAG00000010455 N 0.839
hdlbp Danio rerio ENSDARG00000009830 N 0.832
HDLBP Oryzias latipes ENSORLG00000002226 N 0.823
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.814
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.812
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.811
HDLBP Sorex araneus ENSSARG00000012639 N 0.767
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.766
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.740
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.735
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.734
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.726