HDLBP (Loxodonta africana)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSLAFG00000014826 T18934_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000012417 KH 98 143
ENSLAFP00000012417 KH 152 212
ENSLAFP00000012417 KH 224 284
ENSLAFP00000012417 KH 297 357
ENSLAFP00000012417 KH 366 424
ENSLAFP00000012417 KH 437 497
ENSLAFP00000012417 KH 509 570
ENSLAFP00000012417 KH 583 643
ENSLAFP00000012417 KH 655 716
ENSLAFP00000012417 KH 729 790
ENSLAFP00000012417 KH 802 863
ENSLAFP00000012417 KH 875 967
ENSLAFP00000012417 KH 974 1034
ENSLAFP00000012417 KH 1054 1117
ENSLAFP00000012417 KH 1129 1190

Links

Other KH family RBPs
Other Loxodonta africana RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Hdlbp Mus musculus ENSMUSG00000034088 N 0.972
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.972
LOC100057882 Equus caballus ENSECAG00000012829 N 0.971
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.969
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.968
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.967
HDLBP Homo sapiens ENSG00000115677 N 0.967
HDLBP Canis familiaris ENSCAFG00000012913 N 0.967
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.966
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.965
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.964
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.959
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.956
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.948
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.933
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.925
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.920
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.910
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.909
HDLBP Felis catus ENSFCAG00000010455 N 0.892
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.841
AAH44314 Xenopus laevis AAH44314 N 0.832
hdlbp Danio rerio ENSDARG00000009830 N 0.807
HDLBP Oryzias latipes ENSORLG00000002226 N 0.798
HDLBP Sorex araneus ENSSARG00000012639 N 0.797
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.789
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.786
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.784
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.757
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.740
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.734
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.734
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.724